|   |
493 | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | S | T | Y | A | S | I | I | S | T | I | Q | D | R | G | Y | V | R | V | E | N | R | R | F | Y | A | E | K | M | G | E | I | V | T | D | R | L | E | E | N | F | R | E | L | M | N | Y | D | F | T | A | Q | M | E | N | S | L | D | Q | V | A | N | H | E | A | E | W | K | A | V | L | D | H | F | F | S | D | F | T |
Query Conservation |   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |   |
| . | . | . |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
A | P | S | S | V | F | E | E | V | S | H | L | E | E | K | G | L | V | K | K | K | E | D | G | V | W | I | T | N | N | G | T | R | S | I | N | Y | L | I | K | A | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | V | I | E | I | L | L | V | N | I | . |
. |
. |
G | I | D | K | Q | T | A | C | E | Y | S | K | Q | F | D | Y |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  | G | G |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 90 | . | . | . | . | |
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
  |   |
573 | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | L | D | K | A | E | K | D | P | E | E | G | G | M | R | P | N | Q | M | V | L | T | S | I | D | C | P | T | C | G | R | K | M |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   | . | . | . | . | . | . | . |   |
|
| . |
|   |   |
|
Template Sequence |   |
L | I | P | E | E | I | I | D | K | L | Y | N | Y | L | G | K | P | S | Y | . |
. |
. |
. |
. |
. |
. |
C | P | H | . |
G | L | E | I |
Template Known Secondary structure |   |
G | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | B | . | . | . | . | . | . | . |
| T | T | . | S |
| B |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
| . | . | . | . | . | . | . |
|
|
| . |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
130 | . | . | |
. | . | . | . |
  |