 |
Job Description | P06612 | Confidence | 89.37% | Date | Thu Jan 5 10:59:12 GMT 2012 |
Rank | 29 | Aligned Residues | 63 |
% Identity | 13% | Template | c2pexA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:transcriptional regulator ohrr; |
PDBTitle: structure of reduced c22s ohrr from xanthamonas campestris
|
Resolution | 1.90 Å |
|
 |
  |   |
493 | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | S | T | Y | A | S | I | I | S | T | I | Q | D | R | G | Y | V | R | V | E | N | R | R | F | Y | A | E | K | M | G | E | I | V | T | D | R | L | E | E | N | F | R | E | L | . |
. |
. |
. |
. |
M | N | Y | D | F | T | A | Q | M | E | N | S | L | D | Q | V | A | N |
Query Conservation |   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
| . | . | . | . | . |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
D | S | A | T | L | T | P | L | L | K | R | L | Q | A | A | G | L | V | T | R | T | R | V | I | I | A | L | T | E | T | G | R | A | L | R | S | K | A | G | A | V | P | E | Q | V | F | C | A | S | A | C | S | L | D | E | L | R | Q | L | K | Q | E | L | E | K | L | R | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  | G | G | G | G | S | T | T |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|