 |
Job Description | P06612 | Confidence | 51.40% | Date | Thu Jan 5 10:59:12 GMT 2012 |
Rank | 132 | Aligned Residues | 43 |
% Identity | 28% | Template | c2jvnA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; |
PDBTitle: domain c of human parp-1
|
Resolution | UNK |
|
  |   |
707 | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | I | V | E | C | E | K | C | G | S | E | M | H | L | K | M | G | R | F | G | K | Y | M | A | C | T | N | E | E | . |
. |
. |
. |
. |
C | K | N | T | R | K | I | L | R | N | G | E | V | A | P | P | K | E |
Query Conservation |   |
  |   |   |   |
|
|   |
|
|   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |
|
|
|   |   | . | . | . | . | . |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |
|   | . | . | . | . |
|   |
|   |   |
|
|   |
|
|
|   |   |   |
|   |   |
|   |
|   |   |
|
|
|
|   |
|
Template Sequence |   |
A | L | L | P | C | E | E | C | S | G | Q | L | V | F | K | S | D | A | Y | Y | . |
. |
. |
. |
C | T | G | D | V | T | A | W | T | K | C | M | V | K | T | Q | T | P | N | R | K | E | W | V | T | P | K | E |
Template Known Secondary structure |   |
 |  |
|
|
|
| S | S | S |  |  |  |  |  |  | T | T |  |  |  | . | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S |
|
|  |  |
|
|
|
|
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | |
|
|
|
. | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|