Job Description P06612 Confidence 100.00% Date Thu Jan 5 10:59:12 GMT 2012 Rank 8 Aligned Residues 122 % Identity 99% Template c1yuaA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:topoisomerase i; PDBTitle: c-terminal domain of escherichia coli topoisomerase i Resolution UNK

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		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	G	E	V	A	P	P	K	E	D	P	V	P	L	P	E	L	P	C	E	K	S	D	A	Y	F	V	L	R	D	G	A	A	G	V	F	L	A	A	N	T	F	P	K	S	R	E	T	R	A	P	L	V	E	E	L	Y	R	F	R	D	R	L	P	E	K	L	R	Y	L	A	D	A	P	Q	Q	D	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	N	G	E	V	A	P	P	K	E	D	P	V	P	L	P	E	L	P	C	E	K	S	D	A	Y	F	V	L	R	D	G	A	A	G	V	F	L	A	A	N	T	F	P	K	S	R	E	T	R	A	P	L	V	E	E	L	Y	R	F	R	D	R	L	P	E	K	L	R	Y	L	A	D	A	P	Q	Q	D	P	E
Template Known Secondary structure						S	S		S				S									S	S	S	S									S	S	S						T	T	T	T	S						S		B							T	T	T	T			S	T	T						S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		824	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	K	T	M	V	R	F	S	R	K	T	K	Q	Q	Y	V	S	S	E	K	D	G	K	A	T	G	W	S	A	F	Y	V	D	G	K	W	V	E	G	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	K	T	M	V	R	F	S	R	K	T	K	Q	Q	Y	V	S	S	E	K	D	G	K	A	T	G	W	S	A	F	Y	V	D	G	K	W	V	E	G	K	K
Template Known Secondary structure											T	T	T	T									T	T	S								B		S	S		B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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