Job Description P06612 Confidence 98.96% Date Thu Jan 5 10:59:12 GMT 2012 Rank 12 Aligned Residues 108 % Identity 25% Template c1vddC_ PDB info PDB header:recombination Chain: C: PDB Molecule:recombination protein recr; PDBTitle: crystal structure of recombinational repair protein recr Resolution 2.50 Å

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Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		G	K	A	L	V	I	V	E	S	P	A	K	A	K	T	I	N	K	.	.	.	Y	L	G	S	D	Y	V	V	K	S	S	V	G	H	I	R	D	L	P	T	S	G	S	A	A	K	K	S	A	D	S	T	S	T	K	T	A	K	K	P	K	K	D	E	R	G	A	L	V	N	R	M	G	V	D	P	W	H	N
Query Conservation																				.	.	.
Alig confidence																				.	.	.					.					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	T	I	C	V	V	E	E	P	G	D	V	I	A	L	E	R	S	G	E	Y	R	G	L	.	Y	H	V	L	.	.	H	G	V	L	S	P	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	V	G	P	D	K	L
Template Known Secondary structure		T	T						S	S									T	T	T				S		.					.	.	S	S			B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B		G	G	G	S
Template Predicted Secondary structure																											.					.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.			.	.	110	.	.	.	.																																		.	.	.	.	.	120	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		W	E	A	H	Y	E	V	L	P	G	K	E	K	V	V	S	E	L	K	Q	L	A	E	K	A	D	H	I	Y	L	A	T	D	L	D	R	E	G	E	A	I	A	W	H	L	R	E	V	I	G	G	D	D	A	R	Y	S	R	V	.	.	.	.	.	.	.	.	V	F	N	E	I	T	K	N	A	I	R	Q	A
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	K	P	L	L	P	R	V	G	Q	G	M	E	V	I	L	A	T	G	T	T	V	E	G	D	A	T	A	L	Y	L	Q	R	L	L	E	P	L	G	A	A	I	S	R	I	A	Y	G	V	P	V	G	G	S	L	E	Y	T	D	E	V	T	L	G	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	G	G	G			S	S									S	S	T	T													T	T	T	T												T	T			G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	K	P	G	E	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	G	R	Q	T	V	S
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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