Job Description P06612 Confidence 39.71% Date Thu Jan 5 10:59:12 GMT 2012 Rank 168 Aligned Residues 37 % Identity 19% Template c1s1i9_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:60s ribosomal protein l43; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

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		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	K	G	Y	D	G	P	I	V	E	C	E	K	C	G	S	E	M	H	L	K	M	G	R	F	G	K	Y	M	A	C	T	N	E	E	C	K	N	T	R
Query Conservation
Alig confidence																													.	.				.	.
Template Conservation																													.	.				.	.
Template Sequence		K	L	E	I	Q	Q	H	A	R	Y	D	C	S	F	C	G	K	K	T	V	K	R	G	A	A	G	I	.	.	W	T	C	.	.	S	C	C	K	K	T	V
Template Known Secondary structure		S	S		S	S	S	S	S					T	T	T		S	S						T	T	T		.	.				.	.	S	S	S
Template Predicted Secondary structure																													.	.				.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.			.	.	.	60	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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