Job Description P77335 Confidence 5.38% Date Thu Jan 5 12:27:57 GMT 2012 Rank 38 Aligned Residues 82 % Identity 18% Template c3i5pA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:nucleoporin nup170; PDBTitle: nup170(aa979-1502), s.cerevisiae Resolution 3.20 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		L	K	N	K	L	K	S	V	Q	N	F	F	T	T	L	S	N	T	V	K	Q	A	N	K	D	I	D	A	A	K	L	K	L	T	T	E	I	A	A	I	.	.	G	E	I	K	T	E	T	E	T	T	R	F	Y	V	D	Y	D	D	L	M	L	S	L	L	K	E	A	A	K	K	M	I	N	T	C	N	E	Y
Query Conservation																																										.	.
Alig confidence																			.																							.	.
Template Conservation																			.
Template Sequence		Y	D	K	R	I	L	V	Y	D	L	V	F	D	T	L	I	K	.	V	D	L	R	Q	K	S	Y	E	A	A	L	K	Y	N	D	R	L	F	H	Y	H	M	Y	D	W	L	V	S	Q	N	R	E	E	K	L	L	D	I	E	T	P	F	I	L	P	Y	L	M	E	K	A	G	K	I	S	N	I	L	W	V	Y
Template Known Secondary structure																			.	T				S	T	T					S	S	S																T	T		G	G	G	G	G	G				T	T								T										T
Template Predicted Secondary structure																			.
Template SS confidence
		1098	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.		.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.
		289	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	R	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	R	R	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1204	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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