Job Description P77335 Confidence 3.30% Date Thu Jan 5 12:27:57 GMT 2012 Rank 98 Aligned Residues 52 % Identity 15% Template c1hgeD_ PDB info PDB header:viral protein Chain: D: PDB Molecule:hemagglutinin, (g135r), ha1 chain; PDBTitle: binding of influenza virus hemagglutinin to analogs of its cell-2 surface receptor, sialic acid: analysis by proton nuclear magnetic3 resonance spectroscopy and x-ray crystallography Resolution 2.60 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		L	N	E	A	Q	K	S	L	L	V	S	S	Q	S	F	N	N	A	S	G	K	L	L	A	L	D	S	Q	L	T	N	D	F	S	E	K	S	S	Y	.	.	.	.	.	F	Q	S	Q	V	D	K	I	R	K	E	A	Y
Query Conservation																																									.	.	.	.	.
Alig confidence																																									.	.	.	.	.
Template Conservation
Template Sequence		A	L	E	N	Q	H	T	I	D	L	T	D	S	E	M	N	K	L	F	E	K	T	R	R	Q	L	R	E	N	A	E	E	M	G	N	G	C	F	K	I	Y	H	K	C	D	N	A	C	I	E	S	I	R	N	G	T	Y
Template Known Secondary structure																												G	G	G					S	S	S						S												T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions