Return to main results Retrieve Phyre Job Id

Job DescriptionP12995
Confidence99.89%DateThu Jan 5 11:33:14 GMT 2012
Rank122Aligned Residues341
% Identity12%Templated2gb3a1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100 .........110........
Predicted Secondary structure 





















..





Query SS confidence 



























































. .

















Query Sequence  DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTP. . QPLECVFLADSGSVAVEV
Query Conservation 

   

  

     


 

 
  

                      

  
     ..     
 
  




   
Alig confidence 










..





.







































..

















Template Conservation   
  

 
  
.. 
    .      
          
    
   

 


  
    
       
  
 
   

  
Template Sequence  RGVRIHHLNIG. . QPDLKT. PEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILF
Template Known Secondary structure  TT

SS
..


S

.
TT

SS




TT

TS




GGGS
Template Predicted Secondary structure 







..





.


















Template SS confidence 















































































   2930......... 40..... ....50.........60.........70.........80.........90.........100.....
 
   119120.........130.........140.........150.........160.........170.........180.........190........
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  AMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLM
Query Conservation 


 

            

      

    
   
                    
             
   

  
Alig confidence 




.......

























..............

















........

Template Conservation      
.......   

 


  
 
          
 ..............                  ........  
Template Sequence  SFAVI. . . . . . . ANPGDEILVLEPFYANYNAFAKIAGV. . . . . . . . . . . . . . KLIPVTRRXEEGFAIPQN. . . . . . . . LE
Template Known Secondary structure  .......

TT
S

TT
..............

GGGTS


TT........GG
Template Predicted Secondary structure  .......









..............






........
Template SS confidence 















































































   106...110 .........120.........130...... ...140.........150.... ..
 
   199200.........210.........220.........230.........240.........250.........260.........270 ......
Predicted Secondary structure 








































..

Query SS confidence 







































































. .





Query Sequence  AAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL. . CLGKAL
Query Conservation         



 

     

        
  
  
    
  

 


 

 

 
        
   

 ..   
 
Alig confidence 



















..

















































..



.
Template Conservation                
 



..          
          

 
                       
   
 

. 
Template Sequence  SFINERTKGIVLSNPCNPTG. . VVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSK. F
Template Known Secondary structure  GG

TTSS
TTT
..



TT

TTTT
B
SS



GGGS

TT


.
Template Predicted Secondary structure 

















..




























.
Template SS confidence 















































































   157..160.........170...... ...180.........190.........200.........210.........220.........230.. .
 
   277..280.........290.........300.........310.........320......... 330.........340.........350....
Predicted Secondary structure 


















..



Query SS confidence 




















































. .
























Query Sequence  TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES. . GDWQQQVADIEVQLREQLAPARDAE
Query Conservation    
    
 
     
                
     

 


 
 
     ..             
   
  
    
Alig confidence 

























.....





















..
























Template Conservation     
   
                  .....                                         
       
Template Sequence  SACGARVGCLITRNEELISHAXKLAQ. . . . . GRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKR
Template Known Secondary structure  S
GGG


S
.....S



T

TT


Template Predicted Secondary structure 










.....












Template SS confidence 















































































   235....240.........250.........260 .........270.........280.........290.........300.........
 
   355....360.........370.........380..... ....390... ......400.........410.........
Predicted Secondary structure 











.....


..........








Query SS confidence 






























. . . . .







. . . . . . . . . .

























Query Sequence  MVADVRVLGAIGVVETTHPVNMAALQKFFVE. . . . . QGVWIRPF. . . . . . . . . . GKLIYLMPPYIILPQQLQRLTAAVNR
Query Conservation   
  


 
 
  
       
      
  ..... 

     ..........
  

  
    
 



     
  
Alig confidence 


..

























.....







..........








..














Template Conservation     ..
  
      
                     

    
  
          



  ..   
 
  

 

  
Template Sequence  FTK. . PSGAFYITAELPVEDAEEFARWXLTDFNXDGETTXVAPLRGFYLTPGLGKKEIRIACV. . LEKDLLSRAIDVLXE
Template Known Secondary structure  B

..
SBSS
SSS
S

BTT
GGGG
SSTTTTSS

..S
Template Predicted Secondary structure 
..

























..

Template SS confidence 















































































   310.. .......320.........330.........340.........350.........360.........370 .........380.....
 
   420........
Predicted Secondary structure 
Query SS confidence 








Query Sequence  AVQDETFFC
Query Conservation   
 
     
Alig confidence 



...

Template Conservation 

  ...
 
Template Sequence  GLKX. . . FC
Template Known Secondary structure  ...
Template Predicted Secondary structure  ...
Template SS confidence 








   386... 390.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions