Job Description P12995 Confidence 99.89% Date Thu Jan 5 11:33:14 GMT 2012 Rank 122 Aligned Residues 341 % Identity 12% Template d2gb3a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.50

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	.	.	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V
Query Conservation																																																														.	.
Alig confidence													.	.							.																																									.	.
Template Conservation													.	.							.
Template Sequence		R	G	V	R	I	H	H	L	N	I	G	.	.	Q	P	D	L	K	T	.	P	E	V	F	F	E	R	I	Y	E	N	K	P	E	V	V	Y	Y	S	H	S	A	G	I	W	E	L	R	E	A	F	A	S	Y	Y	K	R	R	Q	R	V	D	V	K	P	E	N	V	L	V	T	N	G	G	S	E	A	I	L	F
Template Known Secondary structure		T	T							S	S		.	.				S			.		T									T			S	S						T	T																T	S						G	G	G					S
Template Predicted Secondary structure													.	.							.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M
Query Conservation
Alig confidence							.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		S	F	A	V	I	.	.	.	.	.	.	.	A	N	P	G	D	E	I	L	V	L	E	P	F	Y	A	N	Y	N	A	F	A	K	I	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	I	P	V	T	R	R	X	E	E	G	F	A	I	P	Q	N	.	.	.	.	.	.	.	.	L	E
Template Known Secondary structure							.	.	.	.	.	.	.			T	T								S			T										T		.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G	T	S				T	T	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.															.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.									.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	.	.	C	L	G	K	A	L
Query Conservation																																																																										.	.
Alig confidence																						.	.																																																			.	.					.
Template Conservation																						.	.																																																									.
Template Sequence		S	F	I	N	E	R	T	K	G	I	V	L	S	N	P	C	N	P	T	G	.	.	V	V	Y	G	K	D	E	X	R	Y	L	V	E	I	A	E	R	H	G	L	F	L	I	V	D	E	V	Y	S	E	I	V	F	R	G	E	F	A	S	A	L	S	I	E	S	D	K	V	V	V	I	D	S	V	S	K	.	F
Template Known Secondary structure		G	G			T	T								S	S		T	T	T		.	.																		T	T								T	T	T	T		B		S	S					G	G	G	S			T	T										.
Template Predicted Secondary structure																						.	.																																																									.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	.	.	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E
Query Conservation																																																							.	.
Alig confidence																												.	.	.	.	.																							.	.
Template Conservation																												.	.	.	.	.
Template Sequence		S	A	C	G	A	R	V	G	C	L	I	T	R	N	E	E	L	I	S	H	A	X	K	L	A	Q	.	.	.	.	.	G	R	L	A	P	P	L	L	E	Q	I	G	S	V	G	L	L	N	L	D	D	S	F	F	D	F	V	R	E	T	Y	R	E	R	V	E	T	V	L	K	K	L	E	E	H	G	L	K	R
Template Known Secondary structure		S		G	G	G								S														.	.	.	.	.		S																T																											T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.						.	.	.	.	390	.	.	.											.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	.	.	.	.	.	Q	G	V	W	I	R	P	F	.	.	.	.	.	.	.	.	.	.	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R
Query Conservation																																	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.																											.	.	.	.	.									.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation					.	.																																																											.	.
Template Sequence		F	T	K	.	.	P	S	G	A	F	Y	I	T	A	E	L	P	V	E	D	A	E	E	F	A	R	W	X	L	T	D	F	N	X	D	G	E	T	T	X	V	A	P	L	R	G	F	Y	L	T	P	G	L	G	K	K	E	I	R	I	A	C	V	.	.	L	E	K	D	L	L	S	R	A	I	D	V	L	X	E
Template Known Secondary structure		B			.	.		S	B	S	S							S	S	S												S			B	T	T								G	G	G	G		S	S	T	T	T	T	S	S								.	.	S
Template Predicted Secondary structure					.	.																																																											.	.
Template SS confidence
		310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Q	D	E	T	F	F	C
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		G	L	K	X	.	.	.	F	C
Template Known Secondary structure						.	.	.
Template Predicted Secondary structure						.	.	.
Template SS confidence
		386	.	.	.				390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions