Job Description P12995 Confidence 100.00% Date Thu Jan 5 11:33:14 GMT 2012 Rank 39 Aligned Residues 361 % Identity 16% Template d2bwna1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.1

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.
Predicted Secondary structure																						.	.	.	.	.	.																								.																									.	.	.	.
Query SS confidence																						.	.	.	.	.	.																								.																									.	.	.	.
Query Sequence		Y	T	S	M	T	S	P	L	P	V	Y	P	V	V	S	A	E	G	C	E	.	.	.	.	.	.	L	I	L	S	D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	.	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	.	.	.	.	T	H
Query Conservation																						.	.	.	.	.	.																								.																									.	.	.	.
Alig confidence																						.	.	.	.	.	.															.	.	.							.																									.	.	.	.
Template Conservation																																										.	.	.
Template Sequence		L	H	D	E	G	R	Y	R	T	F	I	D	I	E	R	E	K	G	A	F	P	K	A	Q	W	N	R	P	D	G	G	K	Q	D	I	T	V	W	C	G	.	.	.	N	D	Y	L	G	M	G	Q	H	P	V	V	L	A	A	M	H	E	A	L	E	A	V	G	A	G	S	G	G	T	R	N	I	S	G	T	T
Template Known Secondary structure					T	T												T	T	S	T	T							T	T	S									S		.	.	.	S		T	T	S	G	G	G																	S				S	B	T	T	T	B
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W
Query Conservation
Alig confidence																.	.																									.	.	.	.	.	.																															.	.	.	.
Template Conservation																.	.																									.	.	.	.	.	.																															.	.	.	.
Template Sequence		A	Y	H	R	R	L	E	A	E	I	A	G	L	H	.	.	Q	K	E	A	A	L	V	F	S	S	A	Y	N	A	N	D	A	T	L	S	T	L	R	V	.	.	.	.	.	.	L	F	P	G	L	I	I	Y	S	D	S	L	N	H	A	S	M	I	E	G	I	K	R	N	A	G	P	K	R	I	.	.	.	.
Template Known Secondary structure															T	.	.	T		S						S																.	.	.	.	.	.		S	T	T							T	T												S							.	.	.	.
Template Predicted Secondary structure																.	.																									.	.	.	.	.	.																															.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	H	N	D	V	A	H	L	R	E	L	I	A	A	D	D	P	A	A	P	K	L	I	A	F	E	S	V	Y	S	M	D	G	D	F	G	P	.	.	.	.	I	K	E	I	C	D	I	A	E	E	F	G	A	L	T	Y	I	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T												S		T	T	S								S	B		T	T	T			B			.	.	.	.												T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template SS confidence
																						159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		246	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		E	I	A	T	.	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		E	V	H	A	V	G	M	Y	G	P	R	G	A	G	V	A	E	R	D	G	L	M	H	R	I	D	I	F	N	G	T	L	A	A	Y	G	V	F	G	G	Y	I	A	A	S	A	R	M	V	D	A	V	R	S	Y	A	P	G	F	I	F	S	T	S	L	P	P	A	I	A	A	G	A	Q	A	S	I	A	F	L
Template Known Secondary structure			T	T	T	T	T	T	S	S	T	T	S								T		G	G	G		S											S																								T	S	B
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.									.	.	.
Predicted Secondary structure																																																												.											.	.	.	.	.	.	.	.
Query SS confidence																																																												.											.	.	.	.	.	.	.	.
Query Sequence		A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	.	F	V	E	Q	G	V	W	I	R	P	.	.	.	.	.	.	.	.	F	G	K
Query Conservation																																																												.											.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.																													.											.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		K	T	A	E	G	Q	K	L	R	D	A	Q	Q	M	H	A	K	V	L	K	M	R	L	K	A	L	.	.	.	.	G	M	P	I	I	D	H	G	S	H	I	V	P	V	V	I	G	D	P	V	H	T	K	A	V	S	D	M	L	L	S	D	Y	G	V	Y	V	Q	P	I	N	F	P	T	V	P	R	G	T	E
Template Known Secondary structure		T	S																									.	.	.	.	T			B				S	S	S																																T	T	T	S		T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	R	F	T	P	S	P	V	H	D	L	K	Q	I	D	G	L	V	H	A	M	D	L	L
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions