Job Description P12995 Confidence 99.91% Date Thu Jan 5 11:33:14 GMT 2012 Rank 87 Aligned Residues 340 % Identity 11% Template d1t3ia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.80

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.																			.
Query SS confidence																																									.	.	.	.																			.
Query Sequence		L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	.	.	.	.	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	.	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A
Query Conservation																																									.	.	.	.																			.
Alig confidence								.	.	.	.	.	.																												.	.	.	.																			.
Template Conservation								.	.	.	.	.	.
Template Sequence		Y	L	D	N	A	A	.	.	.	.	.	.	T	S	Q	K	P	R	A	V	L	E	K	L	M	H	Y	Y	E	N	D	N	A	N	V	G	A	H	Q	L	S	V	R	A	T	D	A	Y	E	A	V	R	N	K	V	A	K	F	I	N	A	R	S	P	R	E	I	V	Y	T	R	N	A	T	E	A	I	N	L	V
Template Known Secondary structure				B	T	T	T	.	.	.	.	.	.																			T							S																					T	T		S		G	G	G					S	S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A
Query Conservation
Alig confidence								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	S	W	G	M	.	.	.	N	N	L	K	A	G	D	E	I	I	T	T	V	M	E	H	H	S	N	L	V	P	W	Q	M	V	A	A	K	T	G	A	V	L	K	F	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	E	Q	E	S	F	D	L	E	H	F	K	T
Template Known Secondary structure					T			.	.	.					T	T							T	T			G	G	G	T																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	S	S	B
Template Predicted Secondary structure								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																				.	.	.	.	.	.	.	.	.	160	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G
Query Conservation
Alig confidence																										.	.	.	.	.																									.	.	.	.	.
Template Conservation																										.	.	.	.	.																									.	.	.	.	.
Template Sequence		L	L	S	E	K	T	K	L	V	T	V	V	H	I	S	N	T	L	G	C	V	N	P	A	.	.	.	.	.	E	E	I	A	Q	L	A	H	Q	A	G	A	K	V	L	V	D	A	C	Q	S	A	P	H	.	.	.	.	.	Y	P	L	D	V	Q	L	I	D	C	D	W	L	V	A	S	G	H	K	M	C	A
Template Known Secondary structure					T	T								S	B		T	T	T		B	B				.	.	.	.	.										T	T								T	T	T	T	T	T	.	.	.	.	.	S								T		S						G	G	G	T	T	S
Template Predicted Secondary structure																										.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.																				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	G	I	G	F	L	Y	G	K	E	E	I	L	E	A	M	P	P	F	F	G	G	G	E	M	I	A	E	V	F	F	D	H	F	T	T	G	E	L	P	H	K	F	E	A	G	T	P	A	I	A	E	A	I	A	L	G	A	A	V	D	Y	L	T	D	L	G	M	E	N	I	H	N	Y	E	V	E	L	T
Template Known Secondary structure			T	T														S				S		S	T	T	S						S	S							T	T	G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.														.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																						.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	.	.	.	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	K	L	I	Y	L	M	P	P	Y	I
Query Conservation																						.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.												.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		H	Y	L	W	Q	G	L	G	Q	I	P	Q	L	R	L	Y	G	P	N	P	K	H	G	D	R	A	A	L	A	S	F	N	V	A	.	G	L	H	A	S	D	V	A	T	M	V	D	Q	D	G	I	A	I	R	S	G	H	H	C	T	Q	P	L	H	R	L	F	D	A	S	G	S	A	R	A	S	L	Y	F	Y
Template Known Secondary structure										T		T	T					S			G	G	G	S		B		S							T	.	T	B											T	T	T				B		S		T	T								T	T											T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	K	E	E	I	D	L	F	L	Q	S	L	Q	A	T	I	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions