Return to main results Retrieve Phyre Job Id

Job DescriptionP12995
Confidence100.00%DateThu Jan 5 11:33:14 GMT 2012
Rank1Aligned Residues427
% Identity98%Templated1s0aa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.71

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  MTTDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF
Query Conservation                 
            
  
 
  
 
 

   

  

     


 

 
  

            
Alig confidence 















































































Template Conservation                              
  
 
  
 
 

   

         

   
 
 

             
Template Sequence  MTTDDLAFDQRHILHPFTSMTSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF
Template Known Secondary structure 




TT

SSS





BTTTS
SSTTTTT
TT
BS

S



Template Predicted Secondary structure 






























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  GGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNS
Query Conservation            

  
          
 
  




   


 

            

      

    
   
     
Alig confidence 















































































Template Conservation            

  
          
    




   


 
          
  

     


        
     
Template Sequence  GGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNS
Template Known Secondary structure  SS


S
TT

SST



TT



SSTTS
TTTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  MHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGI
Query Conservation                 
             
   

  
       



 

     

        
  
  
    
 
Alig confidence 


















.



























































Template Conservation                     .         
   

          



 

     

        
  
  
    
 
Template Sequence  MHSLWKGYLPENLFAPAPQ. SRMGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGI
Template Known Secondary structure  TGGGGTTTS






.SB




GGGGTTT
SS
TTT
B
TT
Template Predicted Secondary structure 


















.




























Template SS confidence 















































































   161........170......... 180.........190.........200.........210.........220.........230.........
 
   241........250.........260.........270.........280.........290.........300.........310.........320
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAA
Query Conservation   

 


 

 

 
        
   

    
 
  
    
 
     
                
     

 


Alig confidence 







































.






































Template Conservation   

 


 

 

 
        
  


   

 
  
 .  


                      
      
 
 
Template Sequence  LLIADEIATGFGRTGKLFACEHAEIAPDILCLGALTGGTM. TLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAA
Template Known Secondary structure 
TTTTTTTTSSSSGGGGGT


S

TTSSSS.


TSTTSS
S


TTTT
Template Predicted Secondary structure 

























.















Template SS confidence 















































































   241........250.........260.........270.........280 .........290.........300.........310.........
 
   321........330.........340.........350.........360.........370.........380.........390.........400
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  NASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLM
Query Conservation   
 
                  
   
  
     
  


 
 
  
       
      
   

     
  

  
Alig confidence 















































































Template Conservation   
 
                  
   
  
     
  
 
 
 
  
       
  
   
   

 
 
 
  


 
Template Sequence  NASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLM
Template Known Secondary structure  T
GGGGG
TTTTSS
B
TT


BTT
Template Predicted Secondary structure 




















Template SS confidence 















































































   321........330.........340.........350.........360.........370.........380.........390.........400
 
   401........410.........420.........
Predicted Secondary structure 







Query SS confidence 




























Query Sequence  PPYIILPQQLQRLTAAVNRAVQDETFFCQ
Query Conservation 
    
 



     
   
 
      
Alig confidence 




























Template Conservation 
    
 
 

     
   
 
      
Template Sequence  PPYIILPQQLQRLTAAVNRAVQDETFFCQ
Template Known Secondary structure 

TT

TSSGGGB

Template Predicted Secondary structure 







Template SS confidence 




























   401........410.........420.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions