Job Description P12995 Confidence 99.76% Date Thu Jan 5 11:33:14 GMT 2012 Rank 209 Aligned Residues 303 % Identity 16% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																																			.	.	.	.	.
Query SS confidence																											.	.	.	.																																			.	.	.	.	.
Query Sequence		A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	.	.	.	.	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	.	.	.	.	.	H	G	D	T	F	G	A	M	S	V	C	D
Query Conservation																											.	.	.	.																																			.	.	.	.	.
Alig confidence																											.	.	.	.															.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	G	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	.	.	.	.	.	.	.	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A
Template Known Secondary structure																T	T			T	T	T								S	S													T	.	.	.	.	.	.	.		T	T								G	G	G	T			G	G	G			B		S	S		B		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.	.	.
Template Sequence		T	S	I	F	F	E	S	M	A	Y	K	V	N	P	D	T	G	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	D	R	L	E	E	N	A	R	L	F	H	P	K	L	.	.	I	I	A	G	T	S	C	Y	S	.	.	.	.	.	.	.	R	N	L	D	Y	G	R	L	R	K	I	A	D
Template Known Secondary structure						S							B		T	T	T		S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S		.	.						S	S			.	.	.	.	.	.	.	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.															.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.
Query Sequence		R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	.	.	.	.	.	.	.	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T
Query Conservation																																																									.	.	.	.	.	.	.
Alig confidence														.																.																											.	.	.	.	.	.	.
Template Conservation														.																.
Template Sequence		E	N	G	A	Y	L	M	A	D	M	A	H	.	I	S	G	L	V	V	A	G	V	V	P	S	P	F	E	.	H	C	H	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	M	I	F	Y	R	R	G	V	R	S	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P
Template Known Secondary structure			T	T								T	T	.	T							T	S	S			G	G	G	.	T		S						S	S	G	G	G				S									S	B					B												T	T	T	T			S
Template Predicted Secondary structure														.																.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	.	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V
Query Conservation																																																																			.
Alig confidence																																																						.	.												.
Template Conservation																																																						.	.
Template Sequence		H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R	Q	V	V	A	N	C	R	A	L	S	A	A	L	V	E	L	G	Y	K	I	V	T	G	G	S	D	N	.	.	H	L	I	L	V	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I
Template Known Secondary structure																	T	S																								T	T				G	G	G	S		S	S	.	.	S						G	G	G	G	T													T	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		389	390	.	.	.	.											.	.	.	.	.					400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.						.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.						.	.	.	.
Query Sequence		W	I	R	P	F	G	.	.	.	.	.	.	.	.	.	.	K	L	I	Y	L	.	.	.	.	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q
Query Conservation								.	.	.	.	.	.	.	.	.	.						.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation
Template Sequence		A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G	I	E
Template Known Secondary structure									S	S		S		T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions