Job Description P12995 Confidence 99.94% Date Thu Jan 5 11:33:14 GMT 2012 Rank 61 Aligned Residues 328 % Identity 15% Template d1lc5a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.46

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A
Query Conservation
Alig confidence														.	.							.															.	.	.	.	.
Template Conservation														.	.							.															.	.	.	.	.
Template Sequence		I	S	P	D	Q	L	L	D	F	S	A	N	.	.	I	N	P	L	G	M	.	P	V	S	V	K	R	A	L	I	D	N	L	D	C	.	.	.	.	.	I	E	R	Y	P	D	A	D	Y	F	H	L	H	Q	A	L	A	R	H	H	Q	V	P	A	S	W	I	L	A	G	N	G	E	T	E	S	I	F	T	V
Template Known Secondary structure		S		G	G	G	S				S	S		.	.			T	T			.											T	G	G	G	.	.	.	.	.	G	G	S				T	T													T	S		G	G	G					S	S
Template Predicted Secondary structure														.	.							.															.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		A	S	G	L	.	.	.	.	.	.	.	.	.	K	P	R	R	A	M	I	V	T	P	G	F	A	E	Y	G	R	A	L	A	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	E	I	R	R	W	S	L	R	E	A	D	G	W	Q	L	T	D	A	I	L	E	A	L	.	.	.	.
Template Known Secondary structure						.	.	.	.	.	.	.	.	.			S							S			T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										G	G	G	T	T				T	T						.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		93	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	.	.	L	G	K	A	L	T
Query Conservation																																																																										.	.
Alig confidence		.	.																		.	.																																																				.	.
Template Conservation		.	.																		.	.
Template Sequence		.	.	T	P	D	L	D	C	L	F	L	C	T	P	N	N	P	T	G	.	.	L	L	P	E	R	P	L	L	Q	A	I	A	D	R	C	K	S	L	N	I	N	L	I	L	D	E	A	F	I	D	F	I	P	H	E	T	G	F	I	P	A	L	K	D	N	P	H	I	W	V	L	R	S	L	T	K	F	Y	A
Template Known Secondary structure		.	.		T	T								S	S		T	T	T		.	.																			T								T	T	G	G	G	S	T	T				S	G	G	G		T	T		T	T							S	T	T	T	T	T
Template Predicted Secondary structure		.	.																		.	.
Template SS confidence
				144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A
Query Conservation
Alig confidence																											.	.	.	.	.																																										.	.	.
Template Conservation																											.	.	.	.	.																																										.	.	.
Template Sequence		I	P	G	L	R	L	G	Y	L	V	N	S	D	D	A	A	M	A	R	M	R	R	Q	Q	M	.	.	.	.	.	P	W	S	V	N	A	L	A	A	L	A	G	E	V	A	L	Q	D	S	A	W	Q	Q	A	T	W	H	W	L	R	E	E	G	A	R	F	Y	Q	A	L	C	.	.	.	Q	L	P	L	L	T
Template Known Secondary structure			T	T	T																				S		.	.	.	.	.	T	T		S											G	G	G																									.	.	.	T	S	T	T
Template Predicted Secondary structure																											.	.	.	.	.																																										.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.						.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.								.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	G	.	.	.	.	.	.	.	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence																		.	.																				.	.	.	.	.	.	.									.	.	.
Template Conservation																		.	.																																			.	.	.
Template Sequence		V	Y	P	G	R	A	N	Y	L	L	L	R	C	E	R	E	.	.	D	I	D	L	Q	R	R	L	L	T	Q	R	I	L	I	R	S	C	A	N	Y	P	G	L	D	S	R	Y	Y	R	V	A	I	R	.	.	.	S	A	A	Q	N	E	R	L	L	A	A	L	R	N	V	L
Template Known Secondary structure						S	S	S							S		T	.	.	T									T	T	T							T	T	S	T	T			T	T								.	.	.
Template Predicted Secondary structure																		.	.																																			.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions