Job Description P12995 Confidence 99.84% Date Thu Jan 5 11:33:14 GMT 2012 Rank 166 Aligned Residues 353 % Identity 10% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																.	.	.	.																													.	.	.	.
Query SS confidence																																.	.	.	.																													.	.	.	.
Query Sequence		R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	.	.	.	.	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	.	.	.	.	Q	P	L	E	C	V	F	L	A	D	S	G	S	V
Query Conservation																																.	.	.	.																													.	.	.	.
Alig confidence																																.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		N	G	V	I	Q	M	G	L	A	E	N	Q	L	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K	A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	R	V	V	M	A	G	G	A	T	G
Template Known Secondary structure		T	S	B				S	S					S	S												T	T	S	S	T	T												T	T																	T	T	T		S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F
Query Conservation
Alig confidence											.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation											.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		A	N	E	T	I	I	F	C	L	.	.	.	.	.	.	.	A	D	P	G	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	I	P	I	H	C	E	S	S	.	N	N	F	K	I	T	S	K	A	V	K	E	A
Template Known Secondary structure											.	.	.	.	.	.	.			T	T							S	S			T	T					T	T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	.	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.														.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																										.	.																																																	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		Y	E	N	A	Q	K	S	N	I	K	V	K	G	L	I	L	T	N	P	S	N	P	L	G	.	.	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E	Q	E	M	T	Y	C	N
Template Known Secondary structure								T	T										S	S		T	T	T		.	.																	T	T	T								T	T	G	G	G			S	S	S										T	S	G	G	G	T	T	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
								269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		K	D	L	V	H	I	V	Y	S	L	S	K	D	M	G	L	P	G	F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	S	S	.	.	.	.	.	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M	R	L	G	K
Template Known Secondary structure		T	T	S							S	T	T	T	S	S		G	G	G								S													T	.	.	.	.	.	T	S														T	T
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		343	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.								.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.								.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure									.																								.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence									.																								.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		L	R	E	Q	L	A	P	.	A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	.	.	.	.	.	.	.	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	G	.	.	.	.	.	.	.	K	L	I	Y	L	M	P	P	Y	I	I	L	P
Query Conservation									.																								.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence									.																								.	.	.	.	.	.	.																							.	.	.	.	.	.	.									.
Template Conservation																																																																													.
Template Sequence		R	H	K	H	F	T	N	G	L	E	V	V	G	I	K	C	L	K	N	N	A	G	L	F	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	E	C	Q	E	P	G	W	F	R	V	C	F	A	.	N	M	D	D
Template Known Secondary structure													T	T			B				S	S	S	S							G	G	G		S	S	S	S														T	S							G	G	G	G	T		S	S	S	S							S	.	S	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	V	D	I	A	L	A	R	I	R	R	F	V	G	V	E
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions