Job Description P12995 Confidence 99.86% Date Thu Jan 5 11:33:14 GMT 2012 Rank 149 Aligned Residues 320 % Identity 16% Template d1h0ca_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.5

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	.	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y
Query Conservation																																							.
Alig confidence																																							.																				.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		P	R	I	M	A	A	G	G	L	Q	M	I	G	S	M	S	K	D	M	Y	Q	I	M	D	E	I	K	E	G	I	Q	Y	V	F	Q	T	R	N	P	L	T	L	V	I	S	G	S	G	H	C	A	L	E	A	A	L	V	.	.	.	.	.	.	.	N	V	L	E	P	G	D	S	F	L	V	G	A	N	G	I
Template Known Secondary structure									T						T	T	S																			T				S						S	S												.	.	.	.	.	.	.					S	S							B	S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																					.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																					.
Template Sequence		W	G	Q	R	A	V	D	I	G	E	R	I	G	V	H	P	M	T	K	D	P	G	G	H	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	Q	E	V	E	E	G	L	A	Q	.	.	.	H	K	P	V	L	L	F	L	T	H	G	E	S	S	T	G	V	L	Q	P	.
Template Known Secondary structure																B			B			T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.				S						S			T	T	T	T					.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																					.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																					.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																							.	.	.																												.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																							.	.	.																												.
Template Sequence		.	.	.	L	D	G	F	G	E	L	C	H	R	Y	K	C	L	L	L	V	D	S	V	A	S	.	.	.	L	G	G	T	P	L	Y	M	D	R	Q	G	I	D	I	L	Y	S	G	S	Q	K	A	L	N	A	P	.	P	G	T	S	L	I	S	F	S	D	K	A	K	K	K	M	Y	S	R	K	T	K	P	F
Template Known Secondary structure		.	.	.		T	T							T	T	T								T	T	T	.	.	.	T	T	T	S				T	T	T	T	T		S						S	S	S	T	T				.	T	T															T	T		S	S			S
Template Predicted Secondary structure		.	.	.																							.	.	.																												.
Template SS confidence
					166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
								290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.
Predicted Secondary structure		.	.	.	.	.	.																																																																								.
Query SS confidence		.	.	.	.	.	.																																																																								.
Query Sequence		.	.	.	.	.	.	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	.	V	L
Query Conservation		.	.	.	.	.	.																																																																								.
Alig confidence		.	.	.	.	.	.																																																																								.
Template Conservation
Template Sequence		S	F	Y	L	D	I	K	W	L	A	N	F	W	G	C	D	D	Q	P	R	M	Y	H	H	T	I	P	V	I	S	L	Y	S	L	R	E	S	L	A	L	I	A	E	Q	G	L	E	N	S	W	R	Q	H	R	E	A	A	A	Y	L	H	G	R	L	Q	A	L	G	L	Q	L	F	V	K	D	P	A	L	R	L
Template Known Secondary structure			S	T	T									T	T		S	S	S						S																																												T			B	S	S		S	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.						.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																										.								.	.	.	.	.								.
Query SS confidence																										.								.	.	.	.	.								.
Query Sequence		G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	.	G	V	W	I	R	P	F	.	.	.	.	.	G	K	L	I	Y	L	M	.	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D
Query Conservation																										.								.	.	.	.	.								.
Alig confidence																										.								.	.	.	.	.								.
Template Conservation
Template Sequence		P	T	V	T	T	V	A	V	P	A	G	Y	D	W	R	D	I	V	S	Y	V	I	D	H	F	D	I	E	I	M	G	G	L	G	P	S	T	G	K	V	L	R	I	G	L	L	G	C	N	A	T	R	E	N	V	D	R	V	T	E	A	L	R	A	A	L	Q	H
Template Known Secondary structure		T	T								T	T																							G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions