Job Description P12995 Confidence 99.93% Date Thu Jan 5 11:33:14 GMT 2012 Rank 75 Aligned Residues 345 % Identity 11% Template d1elua_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.55

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	.	.	.	.	.	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A
Query Conservation																																					.	.	.	.	.
Alig confidence												.	.	.	.	.	.																				.	.	.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		A	N	K	T	Y	F	N	F	G	G	.	.	.	.	.	.	Q	G	I	L	P	T	V	A	L	E	A	I	T	A	M	Y	G	Y	L	Q	E	N	G	P	F	S	I	A	A	N	Q	H	I	Q	Q	L	I	A	Q	L	R	Q	A	L	A	E	T	F	N	V	D	P	N	T	I	T	I	T	D	N	V	T	T	G
Template Known Secondary structure		T	T	S					T	T	T	.	.	.	.	.	.																								S	S	S																						T	T	S		G	G	G					S	S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A
Query Conservation
Alig confidence												.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	D	I	V	L	W	G	L	D	W	.	.	.	.	.	.	H	Q	G	D	E	I	L	L	T	D	C	E	H	P	G	I	I	A	I	V	Q	A	I	A	A	R	F	G	I	T	Y	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	V	A	A	T	L	N	Q	G	D	A	A
Template Known Secondary structure									S			.	.	.	.	.	.		T	T							T	T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	S	S	S	S
Template Predicted Secondary structure												.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																			.	.	.	.	.	140	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A
Query Conservation
Alig confidence																																																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence		A	V	L	A	N	H	L	G	P	K	T	R	L	V	I	L	S	H	L	L	W	N	T	G	Q	V	L	P	L	A	E	I	M	A	V	C	R	R	H	Q	G	N	Y	P	V	R	V	L	V	D	G	A	Q	.	.	.	S	A	G	S	L	P	L	D	F	S	R	L	E	V	D	Y	Y	A	F	T	G	H	K	W
Template Known Secondary structure						T	T			T	T								S	B		T	T	T			B															S	S	S									T	T	.	.	.	T	B	T	T	B				T	T	T	S			S						S	S	S	T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.																					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query Sequence		L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	.	G	D	W	Q	Q
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Alig confidence						.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation						.
Template Sequence		F	A	G	P	.	A	G	V	G	G	L	Y	I	H	G	D	C	L	G	E	I	N	P	T	Y	V	G	W	R	S	I	T	Y	G	A	K	G	E	P	T	G	W	A	E	G	G	K	R	F	E	V	A	T	S	A	Y	P	Q	Y	A	G	L	L	A	A	L	Q	L	H	Q	R	Q	G	T	A	E	E	R	Y	Q
Template Known Secondary structure		T				.	T	T								T	T	T	G	G	G					S			T	T	T					T	T	S							S	G	G	G	G	G			S
Template Predicted Secondary structure						.
Template SS confidence
		225	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.			.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	G	.	.	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R
Query Conservation																																																														.	.
Alig confidence																																																														.	.
Template Conservation
Template Sequence		A	I	C	Q	R	S	E	F	L	W	R	G	L	N	Q	L	P	H	V	H	C	L	A	T	S	A	P	Q	A	G	L	V	S	F	T	V	D	S	P	L	G	H	R	A	I	V	Q	K	L	E	E	Q	R	I	Y	L	R	T	I	A	D	P	D	C	I	R	A	C	C	H	Y	I	T	D	E	E	E	I	N	H
Template Known Secondary structure																	S	T	T				S		S	S			S	S	S								S	S	S												T	T							T	T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		413	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	A	V	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	R	L	A	D
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions