Return to main results Retrieve Phyre Job Id

Job DescriptionP12995
Confidence23.15%DateThu Jan 5 11:33:14 GMT 2012
Rank317Aligned Residues54
% Identity15%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   205....210........ .220.... .....230.........240.........250.
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Query Sequence  IAAVIIEPIVQGAG. . . . . . . . . . . . . . . . GMRMYH. . . . . . . . . . . . . . . . . PEWLKRIRKICDREGILLIADEIATGF
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Template Sequence  VTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHT
Template Known Secondary structure 

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S

STTTT


SS
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   219220.........230.........240.........250.........260.........270.........280.........290........
 
   252......
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Query Sequence  GRTGKLF
Query Conservation 

 
   
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Template Conservation 
      
Template Sequence  AEGGTWT
Template Known Secondary structure  TT
SBSS
Template Predicted Secondary structure 



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   299300.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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