Job Description P12995 Confidence 99.92% Date Thu Jan 5 11:33:14 GMT 2012 Rank 83 Aligned Residues 346 % Identity 11% Template c3l8aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans Resolution 1.54 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		S	D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	.	.	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E
Query Conservation																																																													.	.
Alig confidence														.	.						.																							.																	.	.
Template Conservation														.	.						.																							.
Template Sequence		E	N	N	P	E	L	L	Q	M	W	V	A	.	.	D	M	D	F	L	.	P	V	P	E	I	K	E	A	I	I	N	Y	G	R	E	H	I	F	G	Y	N	Y	.	F	N	D	D	L	Y	Q	A	V	I	D	W	E	R	K	E	H	D	Y	A	V	V	K	E	D	I	L	F	I	D	G	V	V	P	A	I	S
Template Known Secondary structure		T	T		T	T						S	S	.	.				S		.																		S	S				.																							G	G	G					S
Template Predicted Secondary structure														.	.						.																							.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		I	A	L	Q	A	F	S	.	.	.	.	.	.	.	E	K	G	D	A	V	L	I	N	S	P	V	Y	Y	P	F	A	R	T	I	R	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	R	L	V	E	N	S	L	Q	I	I	N	G	R	F	E	I	.	D	F	E	Q	L	E	K	D
Template Known Secondary structure								S	.	.	.	.	.	.	.		T									S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												T	T					.
Template Predicted Secondary structure									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.								.	270
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	.	.	.	.	.	.	.	I	L
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence						.	.																.	.																													.																				.	.	.	.	.	.	.
Template Conservation						.	.																.	.																													.
Template Sequence		I	I	D	N	.	.	N	V	K	I	Y	L	L	C	S	P	H	N	P	G	G	.	.	R	V	W	D	N	D	D	L	I	K	I	A	E	L	C	K	K	H	G	V	I	L	V	S	D	E	I	H	.	Q	D	L	A	L	F	G	N	T	H	H	S	L	N	T	L	D	A	S	Y	K	D	F	T	I	I	L	S
Template Known Secondary structure					T	.	.	T								S	S	B	T	T	T	T	.	.	B																		T								T	T	.	T	T		B		T	T						G	G	G	S		T	T	G	G	G	T
Template Predicted Secondary structure						.	.																.	.																													.
Template SS confidence
		156	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		S	A	T	K	T	F	N	I	A	G	T	K	N	S	F	A	I	I	Q	N	E	S	L	R	R	K	F	Q	Y	R	Q	L	A	N	N	Q	H	E	V	P	T	V	G	M	I	A	T	Q	A	A	F	Q	Y	G	K	P	W	.	L	E	E	L	K	T	V	I	E	G	N	I	K	L	V	I	K	E	L	E	A	K
Template Known Secondary structure			S					T		G	G	G									S														T	T		S																					.
Template Predicted Secondary structure																																																											.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.								.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																								.															.								.	.	.	.	.	.	.
Query SS confidence																								.															.								.	.	.	.	.	.	.
Query Sequence		R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	.	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	.	G	V	W	I	R	P	F	.	.	.	.	.	.	.	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V
Query Conservation																								.															.								.	.	.	.	.	.	.
Alig confidence									.	.														.															.								.	.	.	.	.	.	.										.	.
Template Conservation									.	.																																																					.	.
Template Sequence		T	K	I	K	V	M	E	.	.	P	E	G	T	Y	L	V	W	L	D	F	S	A	Y	A	I	A	Q	P	Q	L	S	E	K	L	Q	N	E	A	K	V	V	L	N	D	G	A	H	F	G	K	E	G	K	Y	F	A	R	L	N	V	A	.	.	T	P	K	N	T	V	Q	E	A	L	S	R	I	I	S	V	F
Template Known Secondary structure		S	S						.	.		S	B	S	S							G	G	G	T			T	T									T	S							G	G	G	G		G	G	G	T	T								.	.	S																S
Template Predicted Secondary structure									.	.																																																					.	.
Template SS confidence
		310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		422	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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