Job Description P12995 Confidence 99.75% Date Thu Jan 5 11:33:14 GMT 2012 Rank 212 Aligned Residues 295 % Identity 14% Template c3hvyC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase family protein, ynbb b.subtilis PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_348457.1) from clostridium acetobutylicum at3 2.00 a resolution Resolution 2.00 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																				.	.	.																														.	.	.
Query SS confidence																				.	.	.																														.	.	.
Query Sequence		N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	.	.	.	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	.	.	.	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A
Query Conservation																				.	.	.																														.	.	.
Alig confidence																				.	.	.																														.	.	.		.	.												.	.	.	.	.	.	.
Template Conservation																																																								.	.												.	.	.	.	.	.	.
Template Sequence		N	Q	L	K	V	L	K	A	F	Q	E	E	R	I	S	E	S	H	F	T	N	S	S	G	Y	G	Y	N	D	I	G	R	D	S	L	D	R	V	Y	A	N	I	F	N	T	E	S	A	F	V	R	P	H	F	.	.	V	N	G	T	H	A	I	G	A	A	L	.	.	.	.	.	.	.	F	G	N	L	R	P
Template Known Secondary structure													T	T			G	G	G	S					T	T		T	T																T		S						T	T		.	.	S	S										.	.	.	.	.	.	.			T			T
Template Predicted Secondary structure																																																								.	.												.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.																																	.
Template Conservation																														.	.	.	.	.	.	.	.	.																																	.
Template Sequence		N	D	T	X	X	S	I	C	G	X	P	Y	D	T	L	H	D	I	I	G	X	D	D	S	K	K	V	G	.	.	.	.	.	.	.	.	.	S	L	R	E	Y	G	V	K	Y	K	X	V	D	L	K	D	G	K	V	D	I	N	T	V	K	E	E	L	K	K	D	D	.	S	I	K	L	I	H	I	Q	R	S
Template Known Secondary structure		T						S	S	S	S			G	G	G					T			T	T			S		.	.	.	.	.	.	.	.	.		T	G	G	G	T									B	T	T	B														T	.	T								S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290
Predicted Secondary structure																												.	.																																															.
Query SS confidence																												.	.																																															.
Query Sequence		V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	.	.	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	.	T	L	T	T	R
Query Conservation																												.	.																																															.
Alig confidence		.																										.	.										.											.	.																									.
Template Conservation		.																																					.											.	.
Template Sequence		.	T	G	Y	G	W	R	K	S	L	R	I	A	E	I	A	E	I	I	K	S	I	R	E	V	N	E	N	V	I	V	F	V	D	N	C	Y	.	G	E	F	V	E	E	K	E	P	T	.	.	D	V	G	A	D	I	I	A	G	S	L	I	K	N	I	G	G	G	I	A	T	T	G	G	Y	I	A	G	K	E
Template Known Secondary structure		.			S	S	S	S																				S	S	S							T	T	.	T	T	T	T	S	S	S		G	G	.	.	G	G	T		S						T	T	S	G	G	G	T	T	T			S
Template Predicted Secondary structure		.																																					.											.	.
Template SS confidence
			185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		291	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure								.	.																																																										.	.
Query SS confidence								.	.																																																										.	.
Query Sequence		E	V	A	E	T	I	.	.	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	.	.	E	M	V	A	D	V	R	V	L	G	A	I	G
Query Conservation								.	.																																																										.	.
Alig confidence								.	.																												.	.	.	.	.																										.	.										.
Template Conservation																																					.	.	.	.	.																																					.
Template Sequence		E	Y	V	T	Q	A	T	F	R	V	T	V	P	G	I	G	G	E	C	G	S	T	F	G	V	X	R	S	L	Y	E	G	L	F	X	.	.	.	.	.	A	P	H	V	T	I	E	A	V	K	G	A	V	F	C	A	R	I	X	E	L	A	G	F	D	V	L	P	K	Y	N	D	K	R	T	D	.	I	I	Q
Template Known Secondary structure												S		T	T	T	G	G	G					T	T												.	.	.	.	.																							T					S		T	T	S			S	S	.	S
Template Predicted Secondary structure																																					.	.	.	.	.																																					.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	K	F	N	D	E	K	K	L	I	D	F	I	K	G	I
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions