Job Description P12995 Confidence 99.89% Date Thu Jan 5 11:33:14 GMT 2012 Rank 123 Aligned Residues 328 % Identity 14% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	.	.	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V
Query Conservation																																																												.	.
Alig confidence													.	.							.														.	.	.	.	.	.	.	.	.																	.	.
Template Conservation													.	.							.														.	.	.	.	.	.	.	.	.
Template Sequence		A	G	R	R	I	I	H	X	E	V	G	.	.	Q	P	G	T	G	A	.	P	R	G	A	V	E	A	L	A	K	S	L	E	.	.	.	.	.	.	.	.	.	G	L	P	A	L	R	Q	R	I	A	R	L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	T	P	G	S	S	G	G	F	L	L
Template Known Secondary structure		T	T									S	.	.	S		S	S		S	.														.	.	.	.	.	.	.	.	.																							G	G	G					S	S
Template Predicted Secondary structure													.	.							.														.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M
Query Conservation
Alig confidence							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		A	F	T	A	L	.	.	.	.	.	.	.	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	Q	I	L	R	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	V	P	V	D	L	P	T	A	P	E	N	R	L	Q	P	V	.	.	.	.	.	.	.	.	P	A
Template Known Secondary structure							.	.	.	.	.	.	.			T	T								S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										G	G	G	T	T	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	.	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T
Query Conservation																																																														.
Alig confidence																						.	.																																							.
Template Conservation																						.	.
Template Sequence		D	F	A	G	L	D	L	A	G	L	X	V	A	S	P	A	N	P	T	G	.	.	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	L	E	L	T	D	E	C	Y	V	I	N	S	F	S	K	Y	F	S
Template Known Secondary structure				T	T	S			S						S	S		T	T	T		.	.																		T	T								T	T	T	T		B	S	S	S					G	G	G	T		S	S	S						S	S	S	T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	.	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V
Query Conservation																																																						.
Alig confidence																											.	.	.	.	.																							.
Template Conservation																											.	.	.	.	.
Template Sequence		X	T	G	W	R	V	G	W	X	V	V	P	E	D	Q	V	R	V	V	E	R	I	A	Q	N	.	.	.	.	.	X	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	D	C	D	A	E	L	Q	A	N	L	D	V	Y	K	A	N	R	K	L	X	L	E	R	L	P	K	A	G	F	T	R	I	A
Template Known Secondary structure			T	T	S									G	G	G											.	.	.	.	.	T	T															T	T																											T				B
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.									.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																		.															.									.	.	.	.	.	.	.	.
Query SS confidence																		.															.									.	.	.	.	.	.	.	.
Query Sequence		A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	.	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	.	G	V	W	I	R	P	F	G	.	.	.	.	.	.	.	.	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q
Query Conservation																		.															.									.	.	.	.	.	.	.	.
Alig confidence			.	.														.															.									.	.	.	.	.	.	.	.									.	.
Template Conservation			.	.																																																						.	.
Template Sequence		P	.	.	P	D	G	A	F	Y	V	Y	A	D	V	S	D	L	T	D	D	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	T	L	R	F	S	Y	A	.	.	R	A	T	A	D	I	E	E	G	L	D	R	L	E	A	F	X	Q
Template Known Secondary structure			.	.			B	T	T							T	T	T		S																				G	G	G	T		T	T	T	G	G	G								.	.	S
Template Predicted Secondary structure			.	.																																																						.	.
Template SS confidence
		309			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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