Job Description P12995 Confidence 99.85% Date Thu Jan 5 11:33:14 GMT 2012 Rank 153 Aligned Residues 322 % Identity 14% Template c3eucB_ PDB info PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase 2; PDBTitle: crystal structure of histidinol-phosphate aminotransferase2 (yp_297314.1) from ralstonia eutropha jmp134 at 2.05 a resolution Resolution 2.05 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		S	D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	.	C	V	F	L	A	D	S	G	S	V	A	V	E	V
Query Conservation																																																																			.
Alig confidence														.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation														.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	S	H	G	L	V	K	L	D	A	X	.	.	E	N	Y	R	L	.	.	P	P	A	L	R	S	E	L	A	A	R	L	G	E	V	S	S	.	.	.	.	.	.	.	.	.	.	.	E	A	L	R	A	K	L	K	E	V	X	Q	V	P	A	G	X	E	V	L	L	G	N	G	S	D	E	I	I	S	X
Template Known Secondary structure					T	T	S				S	S	S	.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.												T			T	T
Template Predicted Secondary structure														.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Sequence		L	A	.	.	.	.	.	.	.	.	L	A	A	A	R	P	G	A	K	V	X	A	P	V	P	G	F	V	X	Y	A	X	S	A	Q	F	A	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	V	G	V	P	L	R	A	D	F	T	L	.	.	.	.	.	.	D	R	G	A	X	L	A	A	X
Template Known Secondary structure				.	.	.	.	.	.	.	.			T			T	T								S												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.									T	T				.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template SS confidence
		100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130														.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	.	L	G	K	A	L	T
Query Conservation																																																																											.
Alig confidence					.	.																.	.																																																				.
Template Conservation					.	.																.	.
Template Sequence		A	E	H	.	.	Q	P	A	I	V	Y	L	A	Y	P	N	N	P	T	G	.	.	N	L	F	D	A	A	D	X	E	A	I	V	R	A	A	Q	G	S	V	C	R	S	L	V	V	V	D	E	A	Y	Q	P	F	A	Q	E	S	W	X	S	R	L	T	D	F	G	N	L	L	V	X	R	T	V	S	K	L	G
Template Known Secondary structure					.	.			S						S	S		T	T	T		.	.															T	B	T	T	S		B								T	T			S	S	S			S	G	G	G	G	G	T		T	T										T	T
Template Predicted Secondary structure					.	.																.	.
Template SS confidence
		153	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A
Query Conservation
Alig confidence																									.	.	.	.	.	.	.																				.	.
Template Conservation																									.	.	.	.	.	.	.																				.	.
Template Sequence		L	A	G	I	R	L	G	Y	V	A	G	D	P	Q	W	L	E	Q	L	D	K	V	R	.	.	.	.	.	.	.	P	P	Y	N	V	N	V	L	T	E	A	T	A	L	F	A	L	E	H	.	.	V	A	V	L	D	E	Q	A	A	Q	L	R	A	E	R	S	R	V	A	E	G	X	A	A	H	G	G	V	T
Template Known Secondary structure			S	S																	G	G	G	S	.	.	.	.	.	.	.		T	T		S													T		.	.																								T	S	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.																				.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.								.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	G	.	.	.	.	.	.	.	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence																	.	.	.																				.	.	.	.	.	.	.									.	.	.
Template Conservation																	.	.	.																																			.	.	.
Template Sequence		V	F	P	S	A	A	N	F	L	L	A	R	V	P	D	.	.	.	A	A	Q	T	F	D	R	L	L	A	R	K	V	L	I	K	N	V	S	K	X	H	P	L	L	A	N	C	L	R	V	T	V	S	.	.	.	T	P	E	E	N	A	Q	F	L	E	A	F	A	A	S	L	Q
Template Known Secondary structure						S	S	S							S		.	.	.											T	T							T	T	S		G	G	G	T	T								.	.	.
Template Predicted Secondary structure																	.	.	.																																			.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions