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Job DescriptionP12995
Confidence99.71%DateThu Jan 5 11:33:14 GMT 2012
Rank222Aligned Residues321
% Identity8%Templatec3e77A_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80..... ....90.........100.... .....110 .........120.........130
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Query Sequence  HPQLNAAMKSQIDAMSHVMFGGITH. . . . . . . . APAIELCRKLVAMTPQPLE. CVFLAD. SGSVAVEVAMKMALQYWQAK
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Template Sequence  PHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGL. . . .
Template Known Secondary structure 
TSSSGGGSSS
TTT

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   18.20.........30.........40.........50.........60.........70.........80.........90...
 
   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  GEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVII
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Template Sequence  . KAGRCADYVVTGAWSAKAAEEAKKF. . . . . . . . . . . . . . GTINIVHPKLGSYTKIPD. . . . . . . PSTWNLNPDASYVYY
Template Known Secondary structure  .STT



STTT..............S
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   94.....100.........110........ .120.........130...... ...140.........150.
 
   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  EPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTR
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Template Sequence  CAN. ETVHGVEFD. . . . . . . . . FIPDVKGAVLVCDMSSNF. . . . . . . LSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRD
Template Known Secondary structure  S.TTTT
S.........S



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TTTT.......TSS


GGG
SGGGTTS
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   152.. .....160... ......170.........180. ........190.........200.........210....
 
   291........300.... .....310.........320....... ..330.........340.........350.........
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Query Sequence  EVAETISNGEAGCF. . . . . . . . . . MHGPTFMGNPLACAAANASLAIL. ESGDWQQQVADIEVQLREQLAPARDAEMVADV
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Template Sequence  DLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVE
Template Known Secondary structure  TS
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TTS
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   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   360. ........370..... ....380.........390.... .....400.........410.........420....
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Query Sequence  RV. . LGAIGVVETTHPVN. . . . MAALQKFFVEQGVWIRPFG. . . KLIYLMPPYIILPQQLQRLTAAVNRAVQDE
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Template Sequence  PQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH
Template Known Secondary structure  GGGB
SSSSTT

TTS
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   295....300.........310.........320.........330.........340.........350.........360........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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