Job Description P12995 Confidence 99.77% Date Thu Jan 5 11:33:14 GMT 2012 Rank 207 Aligned Residues 288 % Identity 18% Template c3e6gA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae Resolution 2.80 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N
Query Conservation
Alig confidence																						.	.																				.	.	.	.	.	.	.	.
Template Conservation																						.	.																				.	.	.	.	.	.	.	.
Template Sequence		Q	S	S	T	H	N	P	T	R	F	A	Y	E	R	C	V	A	A	L	E	.	.	G	G	T	R	A	F	A	F	A	S	G	M	A	A	T	S	T	V	M	.	.	.	.	.	.	.	.	E	L	L	D	A	G	S	H	V	V	A	M	D	D	L	Y	G	G	T	F	R	L	F	E	R	V	R	R	R	T	A
Template Known Secondary structure																						.	.	T		S						S	S										.	.	.	.	.	.	.	.	T	T	S		T	T							S	S
Template Predicted Secondary structure																						.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.									.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Sequence		G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	S	F	V	D	L	T	D	P	A	A	F	K	A	A	I	R	A	D	T	K	M	V	W	I	E	T	P	T	N	P	M	L	.	.	.	.	.	K	L	V	D	I	A	A	I	A	V	I	A	R	K	H	G
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T											T	T								S	S		T	T	T		.	.	.	.	.															T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template SS confidence
		128	.																								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	.	.	.	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A
Query Conservation																																																			.	.	.
Alig confidence												.	.	.	.																																				.	.	.													.	.	.	.	.	.	.
Template Conservation												.	.	.	.																																																			.	.	.	.	.	.	.
Template Sequence		L	L	T	V	V	D	N	T	F	A	.	.	.	.	S	P	M	L	Q	R	P	L	S	L	G	A	D	L	V	V	H	S	A	T	K	Y	L	N	G	H	S	D	M	V	G	G	I	A	V	V	G	D	N	A	E	L	A	E	Q	M	A	F	L	Q	.	.	.	.	.	.	.	N	S	I	G	G	V	Q	G	P
Template Known Secondary structure									S	S	S	.	.	.	.		T	T	T			G	G	G	G	T		S						T	T	T	T	T	T		S	S	S										S													.	.	.	.	.	.	.						B
Template Predicted Secondary structure												.	.	.	.																																																			.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.								240	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.																.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	.	V	N	M	A	A	L	Q
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		F	D	S	F	L	A	L	R	G	L	K	T	L	P	L	R	M	R	A	H	C	E	N	A	L	A	L	A	Q	W	L	E	T	H	P	A	I	E	K	V	I	Y	P	G	L	A	S	H	P	Q	H	V	L	A	K	R	Q	M	S	G	F	G	G	I	V	S	I	V	L	K	G	G	F	D	A	A	K	R	F	C
Template Known Secondary structure												T	T																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.																													.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	F	F	V	E	Q	G	V	W	I	R	P	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		E	K	T	E	L	F	T	L	A	E	S	L	G	G	V	E	S	L	V	N	H	P	A	V	M	T	H	A	S	I	P	V	A	R	R	E	Q	L	G	I	S	D	A	L	V	R	L	S	V	G	I	.	.	.	.	E	D	L	G	D	L	R	G	D	L	E	R	A
Template Known Secondary structure					S	S	S				S					S	S						T	T	T	T	T	T		S	S			T	T	T	T	T	S	S			S	S								S	.	.	.	.	S										T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions