Job Description P12995 Confidence 99.89% Date Thu Jan 5 11:33:14 GMT 2012 Rank 120 Aligned Residues 330 % Identity 14% Template c3cq6E_ PDB info PDB header:transferase Chain: E: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: histidinol-phosphate aminotransferase from corynebacterium2 glutamicum holo-form (plp covalently bound ) Resolution 2.10 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		S	D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	.	.	.	.	.	.	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S
Query Conservation																																																													.	.	.	.	.	.
Alig confidence														.	.							.																			.																				.	.	.	.	.	.
Template Conservation														.	.							.																			.
Template Sequence		P	Q	L	N	V	D	I	R	L	N	T	N	.	.	E	N	P	Y	P	P	.	S	E	A	L	V	A	D	L	V	A	T	V	D	K	I	A	T	E	.	L	N	R	Y	P	E	R	D	A	V	E	L	R	D	E	L	A	A	Y	I	T	K	Q	T	G	V	A	V	T	R	D	N	L	W	A	A	N	G	S	N
Template Known Secondary structure							S				S	S		.	.				S			.																G	G	G	.	T	T	S				T	T																	S					G	G	G					S
Template Predicted Secondary structure														.	.							.																			.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	L	Q	Q	L	L	Q	A	F	.	.	.	.	.	.	.	G	G	P	G	R	T	A	L	G	F	Q	P	S	Y	S	M	H	P	I	L	A	K	G	T	H	T	E	F	I	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	G	A	D	F	R	I	D	M	D
Template Known Secondary structure												.	.	.	.	.	.	.	S		T	T								S			T									T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																						.	.	.	.	.	.	.	.	.	150	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	.	E	H	A	E	I	A	P	D	I	L	C	L
Query Conservation																																																																					.
Alig confidence																						.	.									.	.	.	.																																		.
Template Conservation																						.	.									.	.	.	.
Template Sequence		V	A	L	E	E	I	R	A	K	Q	P	D	I	V	F	V	T	T	P	N	.	.	N	P	T	G	D	V	T	S	.	.	.	.	L	D	D	V	E	R	I	I	N	V	A	P	G	I	V	I	V	D	E	A	Y	A	E	F	S	P	S	P	S	A	T	T	L	L	E	K	Y	P	T	K	L	V	V	S	R	T
Template Known Secondary structure													S						S	S		.	.	T	T	T						.	.	.	.												S	S							T	T	G	G	G		S	S			G	G	G	G	T	T	T		T	T	T
Template Predicted Secondary structure																						.	.									.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D
Query Conservation
Alig confidence																															.	.	.	.	.	.																																												.	.
Template Conservation																															.	.	.	.	.	.																																												.	.
Template Sequence		M	S	A	F	D	F	A	G	G	R	L	G	Y	F	V	A	N	P	A	F	I	D	A	V	M	L	V	R	L	.	.	.	.	.	.	P	Y	H	L	S	A	L	S	Q	A	A	A	I	V	A	L	R	H	S	A	D	T	L	G	T	V	E	K	L	S	V	E	R	V	R	V	A	A	R	L	E	E	L	.	.
Template Known Secondary structure						S		G	G	G																T	T	T	S		.	.	.	.	.	.	T	T		S														T					T	T																				.	.
Template Predicted Secondary structure																															.	.	.	.	.	.																																												.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.			.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	G	.	.	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q
Query Conservation																																												.	.
Alig confidence		.	.																				.	.																				.	.									.	.	.
Template Conservation		.	.																				.	.																														.	.	.
Template Sequence		.	.	G	Y	A	V	V	P	S	E	S	N	F	V	F	F	G	D	F	S	D	.	.	Q	H	A	A	W	Q	A	F	L	D	R	G	V	L	I	R	D	V	G	I	A	G	H	L	R	T	T	I	G	.	.	.	V	P	E	E	N	D	A	F	L	D	A	A	A	E	I	I	K
Template Known Secondary structure		.	.	T							S	S	S								S	S	.	.											T	T				B			S		T	T								.	.	.																	T
Template Predicted Secondary structure		.	.																				.	.																														.	.	.
Template SS confidence
				299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions