Job Description P12995 Confidence 100.00% Date Thu Jan 5 11:33:14 GMT 2012 Rank 17 Aligned Residues 404 % Identity 23% Template c3bs8A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate 1-semialdehyde aminotransferase2 complexed with pyridoxamine-5'-phosphate from bacillus subtilis Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.												.
Query SS confidence													.	.	.	.												.
Query Sequence		T	T	D	D	L	A	F	D	Q	R	H	.	.	.	.	I	W	H	P	Y	T	S	M	T	S	P	.	L	P	V	Y	P	V	V	S	A	E	G	C	E	L	I	L	S	D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S
Query Conservation													.	.	.	.												.
Alig confidence													.	.	.	.												.
Template Conservation
Template Sequence		S	K	T	A	F	K	E	A	Q	K	L	M	P	G	G	V	N	S	P	V	R	A	F	K	S	V	D	M	D	P	I	F	M	E	R	G	K	G	S	K	I	F	D	I	D	G	N	E	Y	I	D	Y	V	L	S	W	G	P	L	I	L	G	H	T	N	D	R	V	V	E	S	L	K	K	V	A	E	Y	G	T
Template Known Secondary structure											T	T	S	G	G	G	S	S	S	G	G	G	G		T	T	T	T	S										B	T					T	T							S	S	G	G	G	T	T		T	T		B	S																S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D
Query Conservation
Alig confidence		.	.	.																							.																									.	.	.	.	.
Template Conservation		.	.	.																							.																									.	.	.	.	.
Template Sequence		.	.	.	S	F	G	A	P	T	E	V	E	N	E	L	A	K	L	V	I	D	R	V	P	S	.	V	E	I	V	R	M	V	S	S	G	T	E	A	T	M	S	A	L	R	L	A	R	G	Y	.	.	.	.	.	T	G	R	N	K	I	L	K	F	E	G	C	Y	H	G	H	G	D	S	L	L	I	K	A	G
Template Known Secondary structure		.	.	.			S	S																S	T	T	.		S						S																	.	.	.	.	.		T									T					S		G	G	G
Template Predicted Secondary structure		.	.	.																							.																									.	.	.	.	.
Template SS confidence
					87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D
Query Conservation
Alig confidence										.	.	.	.	.																																													.
Template Conservation										.	.	.	.	.																																													.
Template Sequence		S	G	V	A	T	L	G	L	.	.	.	.	.	P	D	S	P	G	V	P	E	G	I	A	K	N	T	I	T	V	P	Y	N	D	L	E	S	V	K	L	A	F	Q	Q	F	G	E	D	I	A	G	V	I	V	E	P	V	.	A	G	N	M	G	V	V	P	P	Q	E	G	F	L	Q	G	L	R	D	I	T	E
Template Known Secondary structure		S	S	S	S		B			.	.	.	.	.		S	S	T	T			T	T	S	S	T	T						T	T													G	G	G								S	S	.	B		S	S	S		B				T	T
Template Predicted Secondary structure										.	.	.	.	.																																													.
Template SS confidence
		158	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A
Query Conservation
Alig confidence																.																											.																				.	.
Template Conservation																.																											.																				.	.
Template Sequence		Q	Y	G	S	L	L	I	F	D	E	V	M	T	G	.	F	R	V	D	Y	N	C	A	Q	G	Y	F	G	V	T	P	D	L	T	C	L	G	K	V	I	G	.	G	G	L	P	V	G	A	Y	G	G	K	A	E	I	M	E	Q	I	A	.	.	P	S	G	P	I	Y	Q	A	G	T	L	S	G	N	P	L	A
Template Known Secondary structure				T								T	T	T	T	.	T	T	T	S	T	T						T	T				S						G	G	G	G	.	T	T	S	S												T	T	B	T	.	.	T	T	S	S	B					S	S	T	T
Template Predicted Secondary structure																.																											.																				.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370														.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	.	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	P	V	N	M	A	A	L	Q	K	F
Query Conservation																																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																							.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		M	T	A	G	L	E	T	L	K	Q	L	.	T	P	D	S	Y	K	N	F	I	K	K	G	D	R	L	E	E	G	I	S	K	A	A	E	A	H	G	I	P	H	T	F	N	R	A	G	S	M	I	G	F	F	F	T	N	E	P	V	I	N	Y	E	T	A	K	A	S	D	L	K	L	F	A	S	Y	Y	K	G
Template Known Secondary structure											T		.																										T	T									T	T						S	S	S	S				S					T	T	S
Template Predicted Secondary structure													.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	Q	G	V	W	I	R	P	F	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D	E	T	F
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		M	A	N	E	G	V	F	L	P	P	S	.	Q	F	E	G	L	F	L	S	T	A	H	T	D	E	D	I	E	N	T	I	Q	A	A	E	K	V	F	A	E	I	S	R
Template Known Secondary structure					T	T					S	S	.	S	S	S		B				T	T
Template Predicted Secondary structure													.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.