Job Description P12995 Confidence 100.00% Date Thu Jan 5 11:33:14 GMT 2012 Rank 24 Aligned Residues 398 % Identity 22% Template c2zsmA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		T	T	D	D	L	A	F	D	Q	R	H	I	.	.	.	.	W	H	P	Y	T	S	M	T	S	P	L	P	V	Y	P	V	V	S	A	E	G	C	E	L	I	L	S	D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.												.																																																				.
Template Conservation																													.																																																				.
Template Sequence		S	R	M	L	F	E	R	T	K	E	L	F	P	G	G	V	N	S	P	V	R	A	A	V	K	P	Y	.	P	F	Y	V	K	R	G	E	G	A	Y	L	Y	T	V	D	G	A	R	I	V	D	L	V	L	A	Y	G	P	L	I	L	G	H	K	H	P	R	V	L	E	A	V	E	E	A	L	A	R	G	W	.
Template Known Secondary structure										T	T	T	S	G	G	G	S	S	S	G	G	G	G	G		S	S	S	.									B	T					T	T							S	S	G	G	G	T	T		T	T		B	S													T	T		S	.
Template Predicted Secondary structure																													.																																																				.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P
Query Conservation
Alig confidence		.	.																						.																										.	.	.	.	.
Template Conservation		.	.																						.																										.	.	.	.	.
Template Sequence		.	.	L	Y	G	A	P	G	E	A	E	V	L	L	A	E	K	I	L	G	Y	V	K	.	R	G	G	M	I	R	F	V	N	S	G	T	E	A	T	M	T	A	I	R	L	A	R	G	Y	.	.	.	.	.	T	G	R	D	L	I	L	K	F	D	G	C	Y	H	G	S	H	D	A	V	L	V	A	A	G	G
Template Known Secondary structure		.	.			S	S			S															.	T	T							S	S																.	.	.	.	.											T					S	S	G	G	G	S
Template Predicted Secondary structure		.	.																						.																										.	.	.	.	.
Template SS confidence
				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.																																												.
Template Sequence		V	P	.	.	.	.	.	.	.	.	.	.	.	T	S	A	G	V	P	E	A	V	A	R	L	T	L	V	T	P	Y	N	D	V	E	A	L	E	R	V	F	A	E	Y	G	D	R	I	A	G	V	I	V	E	P	V	.	I	A	N	A	G	V	I	P	P	R	R	E	F	L	A	A	L	Q	R	L	S	R	E
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	S	S	T	T							T	T						T	T													G	G	G								S	S	.	B		S	S	S		B
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																																												.
Template SS confidence
		168	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C
Query Conservation
Alig confidence															.																														.																	.	.
Template Conservation															.																														.																	.	.
Template Sequence		S	G	A	L	L	I	L	D	E	V	V	T	G	.	F	R	L	G	L	E	G	A	Q	G	Y	F	N	I	E	G	D	I	I	V	L	G	K	I	I	G	G	G	F	.	P	V	G	A	V	A	G	S	R	E	V	M	S	L	L	T	.	.	P	Q	G	K	V	F	N	A	G	T	F	N	A	H	P	I	T	M
Template Known Secondary structure			T								T	T	T	T	.	T	T	S	S	T	T							T				S						G	G	G	G	T	T	S	.	S												T	T	B	T	.	.	T	T	S	S	B					T	T	T	T
Template Predicted Secondary structure															.																														.																	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.														.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																			.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	.	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	V	N	M	A	A	L	Q	K	F	F
Query Conservation																																			.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	G	L	A	T	L	K	A	L	E	E	E	P	V	Y	S	V	S	R	E	A	A	K	A	L	E	E	A	A	S	E	V	L	D	R	T	G	L	P	Y	T	I	N	R	V	E	S	M	M	Q	L	F	I	G	V	E	E	V	S	N	A	A	Q	A	R	K	A	D	K	K	F	Y	V	K	L	H	E	E	M
Template Known Secondary structure														S																						T	T	S	S									T	T							T		S			S	S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Q	G	V	W	I	R	P	F	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D	E	T	F
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		L	R	R	G	V	F	I	A	P	.	S	N	L	E	A	V	F	T	G	L	P	H	Q	G	E	A	L	E	I	A	V	E	G	L	R	S	S	L	K	T	V	L	G
Template Known Secondary structure				T	T					S	.	S	T	T	S						T	T		S																				T
Template Predicted Secondary structure											.
Template SS confidence
		392	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.