Job Description P12995 Confidence 100.00% Date Thu Jan 5 11:33:14 GMT 2012 Rank 36 Aligned Residues 372 % Identity 13% Template c2w8wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser Resolution 2.14 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																									.																								.
Query SS confidence																																																									.																								.
Query Sequence		D	D	L	A	F	D	Q	R	H	I	W	H	P	Y	T	S	M	T	S	P	L	P	V	Y	P	V	V	S	A	E	G	C	E	L	I	L	S	D	G	R	R	L	V	D	G	M	S	S	W	W	A	A	I	H	G	.	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	.
Query Conservation																																																									.																								.
Alig confidence												.	.	.	.																																		.	.	.						.																								.
Template Conservation												.	.	.	.																																		.	.	.
Template Sequence		G	L	I	A	E	R	Q	K	L	L	.	.	.	.	D	S	G	V	T	D	P	F	A	I	V	M	E	Q	V	K	S	P	T	E	A	V	I	R	G	K	D	T	I	L	L	G	T	.	.	.	Y	N	Y	M	G	M	T	F	D	P	D	V	I	A	A	G	K	E	A	L	E	K	F	G	S	G	T	Y	G	S
Template Known Secondary structure												.	.	.	.		T	T				G	G	G				S				S	S	S					T	T							S		.	.	.			T	T		G	G	G																	S				S	B
Template Predicted Secondary structure												.	.	.	.																																		.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
					82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D
Query Conservation		.	.	.
Alig confidence		.	.	.																			.	.																							.	.	.	.	.	.	.	.
Template Conservation																							.	.																							.	.	.	.	.	.	.	.
Template Sequence		R	M	L	N	G	T	F	H	D	H	M	E	V	E	Q	A	L	R	D	F	Y	.	.	G	T	T	G	A	I	V	F	S	T	G	Y	M	A	N	L	G	I	I	S	T	L	.	.	.	.	.	.	.	.	A	G	K	G	E	Y	V	I	L	D	A	D	S	H	A	S	I	Y	D	G	C	Q	Q	G	N	A	E
Template Known Secondary structure		T	T	T	T	T																	.	.	T		S						S														.	.	.	.	.	.	.	.	S		T	T							T	T												S		S
Template Predicted Secondary structure																							.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Sequence		I	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	H	N	S	V	E	D	L	D	K	R	L	G	R	L	P	K	E	P	A	K	L	V	V	L	E	G	V	Y	S	M	L	G	D	I	A	P	.	.	.	.	L	K	E	M	V	A	V	A	K	K	H
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T												S		S	S	S								S			T	T	T	T					.	.	.	.											T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template SS confidence
		173	.	.																									.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		G	I	L	L	I	A	D	E	I	A	T	.	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C
Query Conservation													.
Alig confidence													.																																																										.
Template Conservation																																																																							.
Template Sequence		G	A	M	V	L	V	D	E	A	H	S	M	G	F	F	G	P	N	G	R	G	V	Y	E	A	Q	G	L	E	G	Q	I	D	F	V	V	G	T	F	S	K	S	V	G	T	V	G	G	F	V	V	S	N	H	P	K	F	E	A	V	R	L	A	C	R	P	Y	I	F	.	T	A	S	L	P	P	S	V	V	A
Template Known Secondary structure		T								T	T	T	T	T	T	S	S	T	T	S							T	T		T	T	T		S						S	T	T	T	T		S	S									T	T	G	G	G										T	.	S	B
Template Predicted Secondary structure																																																																							.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																				.	.																																										.	.	.
Template Conservation																																				.	.
Template Sequence		T	A	T	T	S	I	R	K	L	M	T	A	H	E	K	R	E	R	L	W	S	N	A	R	A	L	H	G	G	L	K	A	M	G	.	.	F	R	L	G	T	E	T	C	D	S	A	I	V	A	V	M	L	E	D	Q	E	Q	A	A	M	M	W	Q	A	L	L	D	G	G	L	Y	V	N	M	A	R	P	P	A
Template Known Secondary structure											T	T																						T	T	.	.				S		S	S			S	S							S	S														T	T								T	T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
							395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		T	P	A	G	T	F	L	L	R	C	S	I	C	A	E	H	T	P	A	Q	I	Q	T	V	L	G	M	F	Q	A	A	G	R	A
Template Known Secondary structure		S		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.