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Job DescriptionP12995
Confidence100.00%DateThu Jan 5 11:33:14 GMT 2012
Rank30Aligned Residues372
% Identity30%Templatec2pb2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  TSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTP
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Template Sequence  VYAPADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNV. FTNEPALRLGRKLIDAT.
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TT

BTTT

SST
TT
BS
TT




TT.S

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   20.........30.........40.........50.........60.........70.........80 .........90.......
 
   101........110.........120.........130... ......140.........150.........160.........170.........
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Query Sequence  QPLECVFLADSGSVAVEVAMKMALQYWQAKGEA. RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ
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Template Sequence  . FAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPAD. . . . . . . . .
Template Known Secondary structure  .S
SSST
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TT



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TTSSS

S
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   98.100.........110.........120.........130.........140.........150.........160.......
 
   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFA
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Template Sequence  . . . . . . IIHVPFNDLHAVKAVMDDHTCAVVVEPI. QGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFA
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TT
S.TTTTS

T

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   168.170.........180.........190..... ....200.........210.........220.........230.........240
 
   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  CEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADI
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Template Sequence  YMHYGVTPDILTSAKALGGG. FPVSAMLTTQEIASAF. . . . . . . . . . . STYGGNPLACAVAGAAFDIINTPEVLQGIHTK
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S
GGGTTT.S


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   241........250.........260 .........270...... ...280.........290.........300........
 
   340.........350 .........360.........370 .........380.........390.... .....400.........410.....
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Query Sequence  EVQLREQLAPA. RDAEMVADVRVLGAIGVVET. . THPVNMAALQKFFVEQGVWIRPFG. KLIYLMPPYIILPQQLQRLTA
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Template Sequence  RQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADIHEGMQ
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TT
GGGTT
TT
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TT

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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   416...420...
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Query Sequence  AVNRAVQD
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Template Sequence  RFAQAVGK
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   395....400..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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