Job Description P12995 Confidence 99.90% Date Thu Jan 5 11:33:14 GMT 2012 Rank 103 Aligned Residues 338 % Identity 14% Template c2jisA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cysteine sulfinic acid decarboxylase; PDBTitle: human cysteine sulfinic acid decarboxylase (csad) in2 complex with plp. Resolution 1.6 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.
Predicted Secondary structure																					.																																																	.	.	.	.	.	.
Query SS confidence																					.																																																	.	.	.	.	.	.
Query Sequence		L	N	A	A	M	K	S	Q	I	D	A	M	S	H	V	M	F	G	G	.	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	.	.	.	.	.	.	G	E	A	R	Q	R
Query Conservation																					.																																																	.	.	.	.	.	.
Alig confidence																					.																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	R	I	I	T	E	S	L	N	T	S	Q	Y	T	Y	E	I	A	P	V	F	V	L	M	E	E	E	V	L	R	K	L	R	A	L	V	G	W	S	S	G	D	G	I	F	C	P	G	G	S	I	S	N	M	Y	A	V	N	L	A	R	Y	Q	R	Y	P	D	C	K	Q	R	G	L	R	T	L	P	P	L
Template Known Secondary structure														T	T		T	T	T																				T		S	S							S	S																		T	T						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		F	L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	.	.	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V
Query Conservation																																																																	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.											.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Sequence		A	L	F	T	S	K	E	C	H	Y	S	I	Q	K	G	A	A	F	L	G	L	G	T	D	.	.	.	.	.	.	.	.	.	.	S	V	R	V	V	K	A	D	E	R	G	K	M	.	.	.	.	.	.	V	P	E	D	L	E	R	Q	I	G	M	A	E	A	E	G	A	V	P	F	L	V	S	A	T	S	G
Template Known Secondary structure							T	T	S		T									T	T	S		G	G	.	.	.	.	.	.	.	.	.	.	G						B		T	T	S		B	.	.	.	.	.	.															T	T										B	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.											.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																						.								.	.
Query SS confidence																																																						.								.	.
Query Sequence		Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	.	P	D	I	L	C	L	G	.	.	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E
Query Conservation																																																						.								.	.
Alig confidence											.	.	.	.																																								.								.	.
Template Conservation											.	.	.	.
Template Sequence		T	T	V	L	G	A	F	D	P	.	.	.	.	L	E	A	I	A	D	V	C	Q	R	H	G	L	W	L	H	V	D	A	A	W	G	G	S	V	L	L	S	Q	T	H	R	H	L	L	D	G	I	Q	R	A	D	S	V	A	W	N	P	H	K	L	L	A	A	G	L	Q	C	S	A	L	L	L	Q	D	T	S
Template Known Secondary structure			T	T	T			B			.	.	.	.												T								T	T	G	G	G	G	G	G		T	T	T	G	G	G	G	T	T	G	G	G		S						T	T	S	T	T				S								S			S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.									.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	.	.	.	.	.	.	.	.	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	L	G
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																																																							.	.
Template Conservation																																																																																.	.
Template Sequence		N	L	L	K	R	C	H	G	S	K	F	Y	D	V	A	L	D	T	G	D	K	V	V	Q	C	G	R	R	V	D	C	L	K	L	W	L	M	W	K	A	Q	G	D	Q	G	L	E	R	R	I	D	Q	A	F	V	L	A	R	Y	L	V	E	E	M	K	K	R	E	G	F	E	L	V	M	E	P	E	F	.	.
Template Known Secondary structure													S		G	G	G			G	G	G		S		S	S																																								T	S	T	T				S	S			S	S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		364	.	.	.	.	.	370	.	.																	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.							.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.									.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.									.
Query Sequence		A	I	G	V	V	E	T	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	.	.	.	.	.	.	G	K	L	I	Y	L	M	P	.	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.									.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.									.
Template Conservation
Template Sequence		V	N	V	C	F	W	F	V	P	P	S	L	R	G	K	Q	E	S	P	D	Y	H	E	R	L	S	K	V	A	P	V	L	K	E	R	M	V	K	E	G	S	M	M	I	G	Y	Q	P	H	G	T	R	G	N	F	F	R	V	V	V	A	N	S	A	L	T	C	A	D	M	D	F	L	L	N	E	L	E	R	L
Template Known Secondary structure		S									G	G	G	T	T		T	T	S	T	T							T													T	S									T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		421	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	D
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		490	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions