Job Description P12995 Confidence 99.79% Date Thu Jan 5 11:33:14 GMT 2012 Rank 197 Aligned Residues 315 % Identity 12% Template c2fyfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphoserine aminotransferase; PDBTitle: structure of a putative phosphoserine aminotransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																.																																.	.
Query SS confidence																.																																.	.
Query Sequence		H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	.	M	S	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	.	.	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F
Query Conservation																.																																.	.
Alig confidence																.																																.	.																.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.
Template Sequence		R	L	E	Q	L	Q	T	L	T	T	T	A	A	A	L	F	G	T	S	H	R	Q	A	P	V	K	N	L	V	G	R	V	R	S	G	L	A	E	L	F	S	L	P	D	G	Y	E	V	I	L	G	N	G	G	A	T	A	F	W	D	A	A	A	.	.	.	.	.	.	.	.	F	G	L	I	D	K	R	S	L
Template Known Secondary structure							G	G	G	G	T	T	T	G	G	G	T	T	S		T	T	S																		T	T			T	T								T											.	.	.	.	.	.	.	.			T		S	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	F	R	N	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	T	Y	G	E	F	S	A	K	F	A	S	A	V	S	K	N	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	E	P	I	I	I	T	S	D	P	G	S	A	P	E	P	Q	T	D	P	S	V	D	V	I	A	W	A	H	N	E	T	S	T
Template Known Secondary structure						S														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T									T	T		S						S			T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.																			.	.	.	.	.																							.
Template Conservation										.	.	.	.	.	.	.	.	.																			.	.	.	.	.																							.
Template Sequence		G	V	A	V	A	V	R	R	.	.	.	.	.	.	.	.	.	P	E	G	S	D	A	L	V	V	I	D	A	T	S	G	A	G	G	.	.	.	.	.	L	P	V	D	I	A	E	T	D	A	Y	Y	F	A	P	Q	K	N	F	A	S	D	.	G	G	L	W	L	A	I	M	S	P	A	A	L	S	R	I	E
Template Known Secondary structure		T								.	.	.	.	.	.	.	.	.		T	T										T	T	T	T	T	T	.	.	.	.	.	S				G	G	G		S						T	T	S	T	T		S		.	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																			.	.	.	.	.																							.
Template SS confidence
		157	.	.	160	.	.	.	.										.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		298																				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	.	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		A	I	A	A	T	G	R	W	V	P	D	F	L	S	L	P	I	A	V	E	N	S	L	K	N	Q	T	Y	N	T	P	A	I	A	T	L	A	L	L	A	E	Q	I	D	W	L	V	G	N	G	G	L	D	W	A	V	K	R	T	A	D	S	S	Q	R	L	Y	S	W	A	Q	E	R	P	Y	T	T	P	F	V
Template Known Secondary structure						T	T					G	G	G										T	T	T			S	S																				T	T	S																						S	T	T				S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		358	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.						.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure							.	.																															.	.	.	.	.
Query SS confidence							.	.																															.	.	.	.	.
Query Sequence		D	V	R	V	L	.	.	G	A	I	G	V	V	E	T	T	H	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	.	.	.	.	.	F	G	K	L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D
Query Conservation							.	.																															.	.	.	.	.
Alig confidence							.	.																															.	.	.	.	.
Template Conservation
Template Sequence		T	D	P	G	L	R	S	Q	V	V	G	T	I	D	F	V	D	D	V	D	A	G	T	V	A	K	I	L	R	A	N	G	I	V	D	T	E	P	Y	R	K	L	G	R	N	Q	L	R	V	A	M	F	P	A	V	E	P	D	D	V	S	A	L	T	E	C	V	D	W	V	V	E	R
Template Known Secondary structure			S	G	G	G	B		S	S								T	T	S												T	T		B			S			T	T	T			S								T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions