Return to main results Retrieve Phyre Job Id

Job DescriptionP12995
Confidence37.58%DateThu Jan 5 11:33:14 GMT 2012
Rank280Aligned Residues68
% Identity15%Templatec1tcmB_
PDB info PDB header:glycosyltransferaseChain: B: PDB Molecule:cyclodextrin glycosyltransferase; PDBTitle: cyclodextrin glycosyltransferase w616a mutant from bacillus2 circulans strain 251
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190......... 200.........210...... ...220.........230
Predicted Secondary structure 











...










........................







Query SS confidence 





















. . .
















. . . . . . . . . . . . . . . . . . . . . . . .













Query Sequence  PQSRMDGEWDERDMVGFARLMA. . . AHRHEIAAVIIEPIVQG. . . . . . . . . . . . . . . . . . . . . . . . AGGMRMYHPEWLKR
Query Conservation              
   

  
 ...      



 

    ........................ 

        
  
Alig confidence 





















...
















........................













Template Conservation            



 

  


  

  


  
 
 

                   

   
   

   

  

  
Template Sequence  GTCTNLRLYCGGDWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQN
Template Known Secondary structure  SS

STTSB



SSTTGGGT








TT

TT

S
TTT

Template Predicted Secondary structure 























































Template SS confidence 















































































   41........50.........60.........70.........80.........90.........100.........110.........120
 
   231........240.....
Predicted Secondary structure 


Query SS confidence 














Query Sequence  IRKICDREGILLIAD
Query Conservation 
  
    
  

 
Alig confidence 














Template Conservation 

   
  

 



Template Sequence  LIAAAHAKNIKVIID
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 














   121........130.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions