Job Description P12995 Confidence 99.74% Date Thu Jan 5 11:33:14 GMT 2012 Rank 215 Aligned Residues 301 % Identity 15% Template c1c4kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ornithine decarboxylase); PDBTitle: ornithine decarboxylase mutant (gly121tyr) Resolution 2.70 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		P	A	I	E	L	C	R	K	L	V	A	M	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V	E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	G	Y	H	G	D	T	F	.	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W
Query Conservation																																																																	.
Alig confidence															.	.																								.	.	.	.	.	.	.																			.									.	.	.	.	.	.	.	.
Template Conservation															.	.																								.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Sequence		P	A	V	A	A	E	K	H	A	A	R	V	Y	.	.	N	A	D	K	T	Y	F	V	L	G	G	S	S	N	A	N	N	T	V	T	S	A	L	.	.	.	.	.	.	.	V	S	N	G	D	L	V	L	F	D	R	N	N	H	K	S	V	Y	N	S	A	L	A	M	A	G	G	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	.	.	T		S						S	S														.	.	.	.	.	.	.			T	T							T	T										T	T	T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																								.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																						.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	D	G	E	.	.	.	.	W	D	E	R	D	M	V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	.	.	.	.	.	.	.	.	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K
Query Conservation																						.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																.	.	.	.																						.	.	.	.	.	.	.	.											.	.	.	.					.	.	.
Template Conservation		.	.	.	.	.																																																											.	.	.	.					.	.	.
Template Sequence		.	.	.	.	.	R	P	V	Y	L	Q	T	N	R	N	P	Y	G	F	I	G	G	I	Y	D	S	D	F	D	E	K	K	I	R	E	L	A	A	K	V	D	P	E	R	A	K	W	K	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	.	.	.	.	T	I	Y	N	.	.	.	A	H	E	V	V	K
Template Known Secondary structure		.	.	.	.	.											T	T								G	G	G	S									T	T	T	S	S					T		S			B	S						S	B		T	T	S	.	.	.	.					.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																																											.	.	.	.					.	.	.
Template SS confidence
							237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.				.	300	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.															.	290	.
Predicted Secondary structure																							.	.	.	.															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	.	.	.	.	G	K	L	F	A	C	E	H	A	E	I	A	P	D	.	.	.	.	I	L	C	L	G	K	A	L	T	G	G	T	M	T	L	S	A	T	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	E
Query Conservation																							.	.	.	.															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	G	H	L	C	D	Y	I	E	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M	M	R	N	S	S	P	L	L	I	D	D	L	G	P	E	D	P	G	I	I	V	V	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	L	R	Y	C	D	H	K	H
Template Known Secondary structure				G	G	G	B	S							T	T			G	G	G	S	S	G	G	G	G	G	G		T	T	S						T	T	S													S	S			T	T									G	G	G	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																								.	.																																	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.																																	.	.	.	.	.	.	.	.
Query Sequence		V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	.	.	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	A	R	D	A	E	M	V	A	D	V	R	V	.	.	.	.	.	.	.	.
Query Conservation																																								.	.																																	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																										.	.																																	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.
Template Sequence		F	N	N	S	F	N	.	.	.	.	.	.	.	L	F	M	S	T	S	P	F	Y	P	M	Y	A	A	L	D	V	N	A	A	M	Q	E	G	E	A	G	R	K	L	W	H	D	L	L	I	T	T	I	E	A	R	K	K	L	I	K	A	G	S	M	F	R	P	F	V	P	P	V	V	N	G	K	K	W	E	D
Template Known Secondary structure								.	.	.	.	.	.	.			S		S	S																	S																									T	T		S	S			S	S		S			T	T			G	G	G
Template Predicted Secondary structure								.	.	.	.	.	.	.
Template SS confidence
		385	.	.	.	.	390								.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
																																				362	.	.	.	.	.	.	.	370	.	.												.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	I	G	V	V	E	T	T	H	.	.	.	.	.	.	.	.	.	.	.	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	.	R	P	F	G	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		G	D	T	E	D	M	A	N	N	I	D	Y	W	R	F	E	K	G	A	K	W	H	A	Y	E	G	Y	G	D	N	Q	Y	Y	V	D	P	N	K	F	M	L	T	T	P	G	I	N	P	E	T	G	D	Y	E	D	F	G	V	P	A	T	I	V	A	N	Y	L	R	D	H	G	I	I	P	E	K	S	D	L	N
Template Known Secondary structure		S						T	T		G	G	G	G	B			T	T		T	T	T			T	T			T	T						T	T							S	S			T	T	T	T				S	S														T	T				S				S	S
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T	A	A	V	N	R	A	V	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	L	F	L	M	T	P	A	E	T	P	A	K	M	N	N	L	I	T	Q	L	L	Q	L	Q	R	L
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions