Job Description P41052 Confidence 11.02% Date Thu Jan 5 12:01:21 GMT 2012 Rank 52 Aligned Residues 32 % Identity 28% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	M	P	S	S	Y	K	Q	Y	A	V	D	F	S	G	D	G	H	I	N	L	W	D	P	V	D	A	I	G	S	V	A	N	Y	F	K	A	H	G
Query Conservation
Alig confidence									.	.	.	.																			.	.	.	.
Template Conservation									.	.	.	.																			.	.	.	.
Template Sequence		Q	L	L	L	Y	S	F	.	.	.	.	A	D	S	D	G	D	G	Y	G	D	L	N	G	V	T	Q	K	L	.	.	.	.	D	Y	L	N	Q	L	G
Template Known Secondary structure					T	T	T	S	.	.	.	.			S	S	S	S	S	S								T	T		.	.	.	.						T	T
Template Predicted Secondary structure									.	.	.	.																			.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions