Job Description P41052 Confidence 20.24% Date Thu Jan 5 12:01:21 GMT 2012 Rank 28 Aligned Residues 94 % Identity 16% Template c3fcuB_ PDB info PDB header:cell adhesion/blood clotting Chain: B: PDB Molecule:integrin beta-3; PDBTitle: structure of headpiece of integrin aiibb3 in open conformation Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	F	S	G	D	G	H	I	N	L	W	D	P	V	D	A	I	G	S	V	A	N	Y	F	K	A	H	G	W	V	K	G	D	Q	V	A	V	M	A	N	G	Q	A	P	G	L	P	N	G	F	K	T	K	Y	S	I	S	Q	L	A	A	A	G	L	T	P	Q	Q	P	L	G	N	H	Q	Q	A	S	L	L
Query Conservation
Alig confidence								.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	R	N	R	D	.	.	.	A	P	E	G	G	F	D	A	I	M	Q	A	T	V	C	D	E	K	I	G	W	R	N	D	A	S	H	L	L	V	F	T	T	D	A	K	T	H	I	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	R	L	A	G	I
Template Known Secondary structure						S	S	.	.	.	S	S	B																	T			S	S	S									S	S		B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G	T
Template Predicted Secondary structure								.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.																								.	260	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	D	V	G	T	G	Y	Q	Y	W	Y	G	L	P	N	F	Y	T	I	T	R	Y	N	H	S	T	H	Y	A	M	A	V	W	Q	L	G	Q	A	V	A	L	A	R	V	Q
Query Conservation
Alig confidence					.	.														.	.										.	.
Template Conservation					.	.														.	.										.	.
Template Sequence		V	Q	P	.	.	N	D	G	Q	C	H	V	G	S	D	N	H	Y	.	.	S	A	S	T	T	M	D	Y	P	.	.	S	L	G	L	M	T	E	K	L	S	Q	K	N	I	N
Template Known Secondary structure			S		.	.								T	T	T	T	B		.	.	T	T	T	T	T	S				.	.												T	T
Template Predicted Secondary structure					.	.														.	.										.	.
Template SS confidence
		266	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions