 |
Job Description | P41052 | Confidence | 11.60% | Date | Thu Jan 5 12:01:21 GMT 2012 |
Rank | 46 | Aligned Residues | 110 |
% Identity | 19% | Template | c2xhyD_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:6-phospho-beta-glucosidase bgla; |
PDBTitle: crystal structure of e.coli bgla
|
Resolution | 2.30 Å |
|
 |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
E | D | A | L | N | R | A | W | Q | V | Y | G | V | P | P | E | I | I | V | G | I | I | G | V | E | T | R | W | G | R | V | M | G | K | T | R | I | L | D | A | L | A | T | L | S | F | N | Y | P | R | R | A | E | Y | F | S | G | E | L | E | T | F | L | L | M | A | R | D | E | Q | D | D | P | L | N | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |
|
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |
| . | . | . | . | . | . |
|   |
|
|
|
|
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |
|
|   |   |
|
|
Template Sequence |   |
R | Y | A | L | C | E | L | Y | E | R | Y | Q | R | P | . |
. |
. |
. |
. |
. |
L | F | I | V | E | N | G | F | G | A | Y | D | K | . |
. |
. |
. |
. |
. |
V | E | E | D | G | S | I | N | D | D | Y | R | I | D | Y | L | R | A | H | I | E | E | M | K | K | A | V | T | Y | D | G | V | D | L | M | G | Y | T | P | W | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| S |
| . | . | . | . | . | . |  |  |  |  |  |
|
|
|
| B |
|
|
| . | . | . | . | . | . |
|
| T | T | S |
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |
|
| B | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
359 | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 380 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . |
  |
  |   |
213 | . | . | . | . | . | . | 220 | . | . | |
|
. | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | G | S | F | A | G | A | M | G | . |
. |
Y | G | Q | F | M | P | S | S | Y | K | Q | Y | A | V | D | F | S | G | D | G | H | I | N | L | W | . |
D | P | V | D | A | I | G | S | V | A | N | Y | F | K | A | H | G |
Query Conservation |   |
|   |
|
|   |
|
|
|
|
| . | . |   |   |
|
|
|
|
|
|   |   |   |
|
|
|
|   |
|
|
|
|   |   |
|
|   | . |   |   |   |
|
|   |   |
|   |
|
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|   |   |
|   |
|   |   |
|
| . | . | . | . | . |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|   |   |
|
|   |   |
|
|
Template Sequence |   |
C | I | D | C | V | S | F | T | T | G | Q | Y | S | K | R | Y | . |
. |
. |
. |
. |
G | F | I | Y | V | N | K | H | D | D | G | T | G | D | M | S | R | S | R | K | K | S | F | N | W | Y | K | E | V | I | A | S | N | G |
Template Known Secondary structure |   |
S | B |
|
|
|
| S | S | S |
|
| S | S | S | B |
| . | . | . | . | . |
| S |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  | B |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
427 | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|