Job Description P41052 Confidence 10.91% Date Thu Jan 5 12:01:21 GMT 2012 Rank 53 Aligned Residues 71 % Identity 15% Template c2it0A_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii Resolution 2.60 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	K	M	V	N	K	H	G	F	D	R	Q	Q	L	Q	E	I	L	S	Q	A	K	R	L	D	S	V	L	R	L	M	D	N	Q	A	P	T	T	S	V	K	P	P	S	G	P	N	G	A	W	L	R	Y	R	K	K	F	I	T	P	D	N	V	Q	N	G	V	V	F	W	N	Q	Y	E	D	A	L	N	R
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	R	I	A	E	R	L	D	Q	S	G	P	T	V	S	Q	T	V	S	R	M	E	R	D	G	L	L	R	V	A	G	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	E	L	T	E	K	G	R	A	L	A	I	A	V	M	R	K	H	R	L	A	E	R	L
Template Known Secondary structure									T	T																T	T	S					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	Q	V	Y	G	V	P	P	E	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	D	V	I	G	L	P	W	E	E	V
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions