Job Description P41052 Confidence 7.24% Date Thu Jan 5 12:01:21 GMT 2012 Rank 96 Aligned Residues 119 % Identity 13% Template c1vbiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:type 2 malate/lactate dehydrogenase; PDBTitle: crystal structure of type 2 malate/lactate dehydrogenase from thermus2 thermophilus hb8 Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	V	T	L	L	P	L	F	V	L	L	A	A	C	S	S	K	P	K	P	T	E	T	D	T	T	T	G	T	P	S	G	G	F	L	L	E	P	Q	H	N	V	M	Q	M	G	G	D	F	A	N	N	P	N	A	Q	Q	F	I	D	K	M	V	N	K	H	G	F	D	R	Q	Q	L	Q	E	I	L	S	Q
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	Y	A	L	A	L	L	V	E	V	L	S	G	V	L	T	G	A	G	V	A	H	G	I	G	R	M	Y	D	E	W	D	R	P	Q	D	V	G	H	F	L	L	A	L	D	P	G	R	F	V	G	K	E	A	F	L	E	R	M	G	A	L	W	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T	T	T	T	S			G	G	G	S			T	T	T			S	S													G	G	G	T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	L	D	S	V	L	R	L	M	D	N	Q	A	P	T	T	S	V	K	P	P	S	G	P	N	G	A	W	L	R	Y	R	K	K	F	I	T	P	D	N	V	Q	N	G	V	V	F	W	N	Q	Y	E	D	A	L	N	R	A	W	Q	V	Y	G	V	P	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	K	A	T	P	P	A	P	G	H	E	E	V	F	L	P	G	E	.	.	.	.	.	.	.	.	L	E	A	R	R	R	E	R	A	L	A	E	G	M	A	L	P	E	R	V	V	A	E	L	K	A	L	G	E	R	Y	G	V	P	W
Template Known Secondary structure		.	.	.	.	.	.	.			T	S				T	T		S	S				T	T		.	.	.	.	.	.	.	.																																T
Template Predicted Secondary structure		.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
									288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.									.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions