Job Description P41052 Confidence 7.70% Date Thu Jan 5 12:01:21 GMT 2012 Rank 84 Aligned Residues 84 % Identity 14% Template c1u8cB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: a novel adaptation of the integrin psi domain revealed from its2 crystal structure Resolution 3.10 Å

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		242	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		G	H	I	N	.	L	W	D	P	V	D	A	I	G	S	V	A	N	Y	F	K	A	H	G	W	V	K	G	D	Q	V	A	V	M	A	N	G	Q	A	P	G	L	P	N	G	F	K	T	K	Y	S	I	S	Q	L	A	A	A	G	L	T	P	Q	Q	P	L	G	N	H	Q	Q	A	S	L	L	R	L	D	V	G
Query Conservation						.
Alig confidence						.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	R	D	A	P	E	G	G	F	D	A	I	M	Q	A	T	V	C	D	E	K	I	G	W	R	N	D	A	S	H	L	L	V	F	T	T	D	A	K	T	H	I	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	R	L	A	G	I	V	Q	P	N	D
Template Known Secondary structure				S	S	S	S	B													T	T	T	T				T	T	S									S	S		B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T	T			S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1214	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.																								.	1260	.	.	.	.	.	.	.	.	.	1270
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.								.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		T	G	Y	Q	Y	W	Y	G	L	P	N	F	Y	T	I	T	R	Y	N	H	S	T	H	Y	A	M	.	.	.	.	.	.	.	A	V	W	Q	L	G	Q	A	V	A	L	A	R	V	Q
Query Conservation																												.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	C	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	D	N	H	Y	S	A	S	T	T	M	D	Y	P	S	L	G	L	M	T	E	K	L	S	Q	K	N	I	N
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		B		T	T	T	T	T	S															T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1271	.	.	.	.														.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions