Job Description P77258 Confidence 83.29% Date Thu Jan 5 12:26:56 GMT 2012 Rank 464 Aligned Residues 130 % Identity 18% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	.	I	G	I	R	V	S	P	I	G	T
Query Conservation																																																																							.
Alig confidence																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																							.							.	.	.	.
Template Conservation																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	.	.	.	L	A	D	V	T	W	S	S	I	.	.	.	.	.	.	.	.	.	.	.	.	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	.	.	.	.
Template Known Secondary structure														T	T		S						T	T	.	.	.		S	S	B	T	T	B			.	.	.	.	.	.	.	.	.	.	.	.																			S	S										.	.	.	.
Template Predicted Secondary structure																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.													.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300													.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	Y	T	V	E	K
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																									.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	.	.	.	.	.	.	A	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V
Template Known Secondary structure		.	.	.	.	.	.	.	.			G	G	G												T								.	.	.	.	.	.																	S	S							T	T	T						S	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
										241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	L	I	G	K	G	L	I	D	A	V	A	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P
Template Known Secondary structure										T		S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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