Job Description P77258 Confidence 90.28% Date Thu Jan 5 12:26:56 GMT 2012 Rank 412 Aligned Residues 144 % Identity 24% Template d1rbla1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.20

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	.	I	G	I	R	V	S	P	I	G	T
Query Conservation																																																																							.
Alig confidence																							.	.	.	.	.	.	.										.	.	.	.	.	.	.	.																									.							.	.	.	.
Template Conservation																							.	.	.	.	.	.	.										.	.	.	.	.	.	.	.																																.	.	.	.
Template Sequence		K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	.	.	.	.	.	.	.	E	N	I	N	S	Q	P	F	Q	.	.	.	.	.	.	.	.	R	W	R	D	R	F	L	F	V	A	D	A	I	H	K	S	Q	A	E	T	G	E	I	K	G	H	Y	L	N	V	T	.	.	.	.
Template Known Secondary structure														T	T		S						.	.	.	.	.	.	.	T	T		S	S	B	T	T	B	.	.	.	.	.	.	.	.																					S	S										.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.										.	.	.	.	.	.	.	.																																.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.									.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	P	T	C	E	E	M	M	K	R	A	E	F	A	K	E	L	G	M	P	I	I	M	H	D	F	L	T	A	G	F	T	A	N	T	T	L	A	K	W	C	R	D	N	G	V	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V	L	A	K
Template Known Secondary structure		.	.	.	.	.	.	.		S	S														T	T		S																									T								T	T						S		S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
										270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																									.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	I	I	G	A	G	A	Y	T	V	E	K	A	E	T	L	I	G	K	G	L
Query Conservation		.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																																																	.
Template Sequence		C	L	R	L	S	G	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G	D	K	A	S	T	L	G	F	V	D	L	M	R	E	D	H	I	E	A	D	R	S	R	G	V	F	F	T	Q	D	W	A	S	M	P	G	V	L	P	V	A	S	.	G	G	I	H	V	W	H	M	P	A	L	V	E	I	F	G
Template Known Secondary structure									S							S	S	S	S	S																	S					B	G	G	G	T	B		S					T	T										.	S	S			G	G	G
Template Predicted Secondary structure																																																																	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		318	.	320	.	.	.		.	.	.	.	.	.	330	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		I	D	A	V	A	F	.	G	R	D	W	I	A	N	P	D
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		D	D	S	V	L	Q	F	G	G	G	T	L	G	H	P	W
Template Known Secondary structure		S	S						S					T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions