Job Description P77258 Confidence 100.00% Date Thu Jan 5 12:26:56 GMT 2012 Rank 9 Aligned Residues 360 % Identity 37% Template d1q45a_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		S	S	E	K	L	Y	S	P	L	K	V	G	A	I	T	A	A	N	R	I	F	M	A	P	L	T	R	L	R	S	I	E	P	G	D	I	P	T	P	L	M	A	E	Y	Y	R	Q	R	A	.	S	A	G	L	I	I	S	E	A	T	Q	I	S	A	Q	A	K	G	Y	A	G	A	P	G	I	H	S	P	E	Q
Query Conservation																																																			.
Alig confidence																																.	.																		.
Template Conservation																																.	.
Template Sequence		S	N	E	T	L	F	S	S	Y	K	M	G	R	F	D	L	S	H	R	V	V	L	A	P	M	T	R	C	R	A	.	.	L	N	G	V	P	N	A	A	L	A	E	Y	Y	A	Q	R	T	T	P	G	G	F	L	I	S	E	G	T	M	V	S	P	G	S	A	G	F	P	H	V	P	G	I	Y	S	D	E	Q
Template Known Secondary structure						T	T	S					T	T				S		S											S	.	.	G	G	G													T			T	T										S	S	T	T				S	T	T			B		S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	W	K	K	I	T	A	G	V	H	A	E	N	G	H	M	A	V	Q	L	W	H	T	G	R	I	S	H	A	S	L	Q	P	G	G	Q	A	P	V	A	P	S	A	L	S	A	G	T	R	T	S	L	R	D	E	N	G	Q	A	I	R	V	E	T	S	M	P	R	A	L	E	L	E	E	I	P	G	I
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		V	E	A	W	K	Q	V	V	E	A	V	H	A	K	G	G	F	I	F	C	Q	L	W	H	V	G	R	A	S	H	A	V	Y	Q	P	N	G	G	S	P	I	S	S	T	N	K	.	P	I	S	E	N	R	W	R	V	L	L	P	D	G	S	H	V	K	Y	P	K	P	R	A	L	E	A	S	E	I	P	R	V
Template Known Secondary structure															T	T											T	T	S			G	G	G	S	G	G	G						S	S	S		.				T	T	T						T	T	S													G	G	G
Template Predicted Secondary structure																																																.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	D	Y	C	L	S	A	L	N	A	I	R	A	G	F	D	G	I	E	I	H	G	A	H	G	Y	L	I	D	Q	F	L	K	D	G	I	N	D	R	T	D	Q	Y	G	G	S	I	A	N	R	C	R	F	L	K	Q	V	V	E	G	V	V	S	A	I	G	A	S	K	V	G	V	R	V	S	P	A	I	D
Template Known Secondary structure																T		S								T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	.	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	A	G	A	Y	T	V	E	K	A	E	T	L	I	G	K	G	L	I	D
Query Conservation																											.
Alig confidence							.																				.
Template Conservation							.
Template Sequence		H	L	D	A	T	.	D	S	D	P	L	S	L	G	L	A	V	V	G	M	L	N	K	L	Q	G	V	N	G	S	K	L	A	Y	L	H	V	T	Q	P	R	E	E	E	A	K	L	M	K	S	L	R	M	A	Y	N	G	T	F	M	S	S	G	G	F	N	K	E	L	G	M	Q	A	V	Q	Q	G	D	A	D
Template Known Secondary structure		G	G	G			.		S																			T	T	S	S			S																						S		S						S	S												T	T	S		S
Template Predicted Secondary structure							.
Template SS confidence
		245	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		A	V	A	F	G	R	D	W	I	A	N	P	D	L	V	A	R	L	Q	R	K	A	E	L	N	P	Q	R	A	E	S	F	Y	G	G	.	G	A	E	G	Y	T	D	Y	P	T	L
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		L	V	S	Y	G	R	L	F	I	A	N	P	D	L	V	S	R	F	K	I	D	G	E	L	N	K	Y	N	R	K	T	F	Y	T	Q	D	P	V	V	G	Y	T	D	Y	P	F	L
Template Known Secondary structure						S							T	T							T	T								G	G	G	S	S				S	S	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions