Job Description P77258 Confidence 98.97% Date Thu Jan 5 12:26:56 GMT 2012 Rank 45 Aligned Residues 224 % Identity 20% Template d1goxa_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	K	V	G	A	I	T	A	A	N	R	I	F	M	A	P	L	T	R	L	R	S	I	E	P	G	D	I	P	T	P	L	M	A	E	Y	Y	R	Q	R	A	S	A	G	L	I	I	S	E	A	T	Q	I	S	A	Q	A	K	G	Y	A	G	A	P	G	I	H	S	P	E	Q	I	A	A	W	K	K	I
Query Conservation
Alig confidence																														.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	T	T	I	L	G	F	K	I	S	M	P	I	M	I	A	P	T	A	M	Q	K	M	A	H	P	E	.	.	.	G	E	Y	A	T	A	R	A	A	S	A	A	G	T	I	M	T	L	S	S	W	A	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure							T	T				S	S	S							S		G	G	G	T		T	T	.	.	.												T	T							T	T		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																								.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	G	V	H	A	E	N	G	H	M	A	V	Q	L	W	H	T	G	R	I	S	H	A	S	L	Q	P	G	G	Q	A	P	V	A	P	S	A	L	S	A	G	T	R	T	S	L	R	D	E	N	G	Q	A	I	R	V	E	T	S	M	P	R	A	L	E	L	E	E	I	P	G	I	V	N	D	F	R	Q	A
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	V	A	S	T	G	P	G	I	R	F	F	Q	L	Y	V	Y	K	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	V	A	Q	L
Template Known Secondary structure						T	T												B	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																																																						.	.	.	.	.	140
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.													.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	.	.	.	.	.	.	.	.	.	.	.	.	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	.	.	.	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.																	.
Template Conservation																																																																												.
Template Sequence		V	R	R	A	E	R	A	G	F	K	A	I	A	L	T	V	D	T	P	R	L	G	R	R	E	A	D	I	K	N	R	F	V	L	P	P	F	L	T	L	K	N	F	E	G	I	D	L	G	L	S	S	Y	V	A	G	Q	I	D	R	S	L	S	W	K	D	V	A	W	L	Q	T	I	T	.	S	L	P	I	L
Template Known Secondary structure								T	T									S		S	S										T	T					T	T				G	G	G	S	S	S											T	B		T	T														.		S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.		.	.	.
Predicted Secondary structure																																										.	.																							.	.											.
Query SS confidence																																										.	.																							.	.											.
Query Sequence		I	R	V	S	P	I	G	T	F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	.	.	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	.	.	H	G	P	I	I	G	A	G	A	Y	.	T	V	E
Query Conservation																																										.	.																							.	.											.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																							.	.											.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	G	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	E	D	A	R	L	A	V	Q	H	G	A	A	G	I	I	V	S	N	H	G	A	R	Q	L	D	Y	V	P	A	T	I	M	A	L	E	E	V	V	K	A	A	Q	G	R	I	P	V	F	L	D	G	G	V	R	R	G	T
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T		S							G	G	G	T	S	S	T	T															T	T	T	S	S						S	S			S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.																	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	E	T	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	W	I
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		D	V	F	K	A	L	A	L	G	.	A	A	G	V	F	I	G	R	P	V	V
Template Known Secondary structure										T	.		S
Template Predicted Secondary structure											.
Template SS confidence
		293	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions