Job Description P77258 Confidence 97.49% Date Thu Jan 5 12:26:56 GMT 2012 Rank 211 Aligned Residues 133 % Identity 14% Template c3n4fD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from geobacillus sp. y412mc10 Resolution 1.88 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	.	I	G	I	R	V	S	P	I	G
Query Conservation																																																																								.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		V	A	L	X	Q	E	E	A	X	Q	G	Y	A	K	G	Q	R	H	F	K	I	K	V	G	R	G	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	X	P	L	W	E	G	T	K	R	D	I	A	I	V	R	G	I	S	E	V	A	G	P	A	G	K	I	X	I	D	A	N	.	.	.
Template Known Secondary structure														T	T	T										T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S																						T	T								T	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	A	G	A	Y	T	V	E	K	A	E	T	L	I	G	K	G	L	I	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.																														.	.
Template Conservation		.	.	.	.	.	.	.																														.	.
Template Sequence		.	.	.	.	.	.	.	N	A	Y	N	L	N	L	T	K	E	V	L	A	A	L	S	D	V	N	L	Y	W	L	E	E	A	F	H	E	.	.	D	E	A	L	Y	E	D	L	K	E	W	L	G	Q	R	G	Q	N	V	L	I	A	D	G	E	G	L	A	S	P	H	L	I	E	W	A	T	R	G	R	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	T														T	T	T	S								S	S	S		.	.																T										S	S			T	T							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																														.	.
Template SS confidence
									210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		281	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions