Job Description P77258 Confidence 77.04% Date Thu Jan 5 12:26:56 GMT 2012 Rank 495 Aligned Residues 91 % Identity 24% Template c3m1nB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:sonic hedgehog protein; PDBTitle: crystal structure of human sonic hedgehog n-terminal domain Resolution 1.85 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.		.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.					.								.
Query SS confidence																																			.	.					.								.
Query Sequence		I	S	A	Q	A	K	G	Y	A	G	A	P	G	I	H	S	P	E	Q	I	A	A	W	K	K	I	T	A	G	V	H	A	E	.	.	N	G	H	M	.	A	V	Q	L	W	H	T	.	G	R	I	S	H	A	S	L	Q	P	G	G	Q	A	P	V	A	P	S	A	L	S	A	G	T	R	T	S	L	R	D	E
Query Conservation																																			.	.					.								.
Alig confidence																																			.	.					.								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	F	K	D	E	E	N	T	G	A	D	R	L	M	T	Q	R	C	K	D	K	L	N	A	L	A	I	S	V	M	N	Q	W	P	G	V	K	L	R	V	T	E	G	W	D	E	D	G	H	H	S	E	E	S	L	H	Y	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	S	S	S	G	G	G																					S	T	T									S		S	S			S		S	S		G	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		N	G	Q	A	I	R	V	E	T	S	M	P	R	A	L	E	L	E	E	I	P	G	I	V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	.	.	.	.	.	.	E	L	H	S	A
Query Conservation																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	R	A	V	D	I	T	T	S	D	R	D	R	S	K	Y	G	M	L	A	R	L	A	V	E	A	G	F	D	W	V	Y	Y	E	S	K	A	H	I	H	C	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.								T	T			G	G	G											T	T		S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions