Job Description P77258 Confidence 96.78% Date Thu Jan 5 12:26:56 GMT 2012 Rank 259 Aligned Residues 128 % Identity 15% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T
Query Conservation
Alig confidence																												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Sequence		E	Q	S	Y	A	R	L	I	K	R	Q	I	E	N	G	I	D	A	V	V	P	V	G	T	T	G	.	.	.	.	E	S	A	T	L	T	H	E	E	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	C	I	E	I	A	V	E	T	C	K	G	T	K	V	K	V	L	A	G	A	.	.	.
Template Known Secondary structure														T	T	T						T	T	S	T	T	T	.	.	.	.	T	G	G	G	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S	S								.	.	.
Template Predicted Secondary structure																												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60																.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.	.		.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																								.																							.	.	.	.	.	.				.
Query SS confidence																																								.																							.	.	.	.	.	.				.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	.	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	.	.	.	.	.	.	A	G	A	.	Y	T	V	E	K	A	E	T	L
Query Conservation																																								.																							.	.	.	.	.	.				.
Alig confidence		.	.	.	.	.	.																																	.																							.	.	.	.	.	.				.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	S	N	A	T	H	E	A	V	G	L	A	K	F	A	K	E	H	G	A	D	G	I	L	S	V	A	P	Y	Y	N	K	P	T	Q	Q	G	L	Y	E	H	Y	K	A	I	A	Q	S	V	D	I	P	V	L	L	Y	N	V	P	G	R	T	G	C	E	I	S	T	D	T	I	I	K	L
Template Known Secondary structure		.	.	.	.	.	.			S	S														T	T		S									S	S																			S	S												S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		313	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	D	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions