Job Description P77258 Confidence 100.00% Date Thu Jan 5 12:26:56 GMT 2012 Rank 11 Aligned Residues 330 % Identity 24% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.
Predicted Secondary structure				.	.																																																	.	.																					.
Query SS confidence				.	.																																																	.	.																					.
Query Sequence		M	S	.	.	S	E	K	L	Y	S	P	L	K	V	G	A	I	T	A	A	N	R	I	F	M	A	P	L	T	R	L	R	S	I	E	P	G	D	I	P	T	P	L	M	A	E	Y	Y	R	Q	R	A	.	.	S	A	G	L	I	I	S	E	A	T	Q	I	S	A	Q	A	K	G	Y	A	.	G	A	P	G	I
Query Conservation				.	.																																																	.	.																					.
Alig confidence				.	.																																		.	.	.	.												.	.																					.
Template Conservation																																							.	.	.	.
Template Sequence		V	A	A	P	Y	D	V	L	F	E	P	V	Q	I	G	P	F	T	T	K	N	R	F	Y	Q	V	P	H	C	N	G	M	G	Y	R	D	P	.	.	.	.	S	A	Q	A	S	M	R	K	I	K	A	E	G	G	W	S	A	V	C	T	E	Q	V	E	I	H	A	T	S	D	I	A	P	F	I	E	L	R	I
Template Known Secondary structure				T	T	G	G	G	G	G						T	T				S	S	S									S		S	S	S			.	.	.	.													T	T		S										S	G	G	G			T	T	S
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	P	E	Q	I	A	A	W	K	K	I	T	A	G	V	H	A	E	N	G	H	M	A	V	Q	L	W	H	T	G	R	I	S	H	A	S	L	Q	P	G	G	Q	A	P	V	A	P	S	A	L	S	A	G	T	R	T	S	L	R	D	E	N	G	Q	A	I	R	V	E	T	S	M	P	R	A	L	E	L	E
Query Conservation
Alig confidence																																								.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	D	D	Q	D	L	P	A	L	K	R	I	A	D	A	I	H	E	G	G	G	L	A	G	I	E	L	A	H	N	G	M	N	A	P	N	Q	L	.	.	S	R	E	T	P	L	G	P	G	H	L	P	V	A	P	D	T	I	.	.	.	.	.	.	.	.	.	.	.	A	P	I	Q	A	R	A	M	T	K	Q
Template Known Secondary structure		S	S	G	G	G															T											G	G	G				T	T	.	.	T							S	S	S					S	S			.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																								.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.												.	140	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.
Predicted Secondary structure																																			.																																											.
Query SS confidence																																			.																																											.
Query Sequence		E	I	P	G	I	V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	.	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	.	I	G	I
Query Conservation																																			.																																											.
Alig confidence																																			.																																											.
Template Conservation
Template Sequence		D	I	D	D	L	R	R	W	H	R	N	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C
Template Known Secondary structure																					T		S								T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.									.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.																														.
Query SS confidence																																												.	.	.	.	.	.	.	.																														.
Query Sequence		R	V	S	P	I	G	T	F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	.	.	.	.	.	.	.	.	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	A	G	A	Y	.
Query Conservation																																												.	.	.	.	.	.	.	.																														.
Alig confidence										.	.	.	.																			.												.	.	.	.	.	.	.	.																														.
Template Conservation										.	.	.	.																			.
Template Sequence		R	I	T	V	E	E	E	I	.	.	.	.	D	G	G	I	T	R	E	D	I	E	G	V	L	R	E	L	G	E	.	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V	A	G	L	K	K	L	T	T	K	P	V	V	G	V	G	R	F	T
Template Known Secondary structure					S				S	.	.	.	.	T	T	S														T	T	.	S	S	S							S	S					S			T	T	T			T	T	T	T					T	T	T	G	G	G		S	S						S
Template Predicted Secondary structure										.	.	.	.																			.
Template SS confidence
		230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.		.	.	350	.	.
Predicted Secondary structure																																							.	.							.
Query SS confidence																																							.	.							.
Query Sequence		T	V	E	K	A	E	T	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	W	I	A	N	P	D	L	V	A	R	L	Q	R	K	A	.	.	E	L	N	P	Q	R	.	A	E	S	F	Y
Query Conservation																																							.	.							.
Alig confidence																																							.	.							.
Template Conservation
Template Sequence		S	P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L	I	G	A	A	R	P	S	I	A	D	P	F	L	P	N	K	I	R	D	G	R	L	N	L	I	R	E	C	I	G	C	N	I	C	V
Template Known Secondary structure												T	T	S		S					S							T	T								T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions