Job Description P77258 Confidence 100.00% Date Thu Jan 5 12:26:56 GMT 2012 Rank 19 Aligned Residues 323 % Identity 31% Template c3gr7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		M	S	S	E	K	L	Y	S	P	L	K	V	G	A	I	T	A	A	N	R	I	F	M	A	P	L	T	R	L	R	S	I	E	P	G	D	I	P	T	P	L	M	A	E	Y	Y	R	Q	R	A	.	.	S	A	G	L	I	I	S	E	A	T	Q	I	S	A	Q	A	K	G	Y	A	G	A	P	G	I	H	S	P
Query Conservation																																																				.	.
Alig confidence				.																																																.	.
Template Conservation				.
Template Sequence		M	N	.	T	M	L	F	S	P	Y	T	I	R	G	L	T	L	K	N	R	I	V	M	S	P	M	C	M	Y	S	C	D	T	K	D	G	A	V	R	T	W	H	K	I	H	Y	P	A	R	A	V	G	Q	V	G	L	I	I	V	E	A	T	G	V	T	P	Q	G	R	I	S	E	R	D	L	G	I	W	S	D
Template Known Secondary structure				.		S	T	T	S					T	T				S	S	S												T	T	S	S	S																T	T		S									S	S	G	G	G		S	S	T	T	S				S	S	T
Template Predicted Secondary structure				.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	I	A	A	W	K	K	I	T	A	G	V	H	A	E	N	G	H	M	A	V	Q	L	W	H	T	G	R	I	S	H	A	S	L	Q	P	G	G	Q	A	P	V	A	P	S	A	L	S	A	G	T	R	T	S	L	R	D	E	N	G	Q	A	I	R	V	E	T	S	M	P	R	A	L	E	L	E	E	I	P
Query Conservation
Alig confidence																																		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	H	I	A	G	L	R	E	L	V	G	L	V	K	E	H	G	A	A	I	G	I	Q	L	A	H	A	G	R	K	S	Q	.	.	.	.	.	V	P	G	E	I	I	A	P	S	A	V	P	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	S	P	T	P	K	E	M	T	K	A	D	I	E
Template Known Secondary structure		T															T	T											G	G	G			.	.	.	.	.	S	S	S					S	S	S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.															.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I
Query Conservation
Alig confidence																																																																							.
Template Conservation																																																																							.
Template Sequence		E	T	V	Q	A	F	Q	N	G	A	R	R	A	K	E	A	G	F	D	V	I	E	I	H	A	A	H	G	Y	L	I	N	E	F	L	S	P	L	S	N	R	R	Q	D	E	Y	G	G	S	P	E	N	R	Y	R	F	L	G	E	V	I	D	A	V	R	E	V	W	D	.	G	P	L	F	V	R	I	S	A	S
Template Known Secondary structure																		T		S								T	T									T	T	T					S	T	T	S	S	S																					.	S								S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.						280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.
Predicted Secondary structure																																											.	.	.	.	.																										.
Query SS confidence																																											.	.	.	.	.																										.
Query Sequence		G	T	F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	.	.	.	.	.	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	A	G	A	Y	.	T	V	E	K	A	E	T	L
Query Conservation																																											.	.	.	.	.																										.
Alig confidence					.	.	.	.																																			.	.	.	.	.																										.
Template Conservation					.	.	.	.
Template Sequence		D	Y	H	.	.	.	.	P	D	G	L	T	A	K	D	Y	V	P	Y	A	K	R	M	K	E	Q	G	V	D	L	V	D	V	S	S	G	A	I	V	P	A	R	M	N	V	Y	P	G	Y	Q	V	P	F	A	E	L	I	R	R	E	A	D	I	P	T	G	A	V	G	L	I	T	S	G	W	Q	A	E	E	I
Template Known Secondary structure				S	.	.	.	.	T	T	S			G	G	G											T	T											S	S								T	T	T	T											T	T							S	S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		I	G	K	G	L	I	D	A	V	A	F	G	R	D	W	I	A	N	P	D	L	V	A	R	L	Q	R	K	A	.	.	E	L	N	P	Q	R	A
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		L	Q	N	G	R	A	D	L	V	F	L	G	R	E	L	L	R	N	P	Y	W	P	Y	A	A	A	R	E	L	G	A	K	I	S	A	P	V	Q
Template Known Secondary structure				T	T	S		S												T	T									T	T							G	G
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions