Job Description P77258 Confidence 96.27% Date Thu Jan 5 12:26:56 GMT 2012 Rank 286 Aligned Residues 130 % Identity 20% Template c3g0sA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2 Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	.	I	G	I	R	V	S	P	I	G	T
Query Conservation																																																																							.
Alig confidence																											.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.						.	.	.	.	.
Template Conservation																											.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		S	C	L	K	K	L	I	D	Y	H	V	A	N	G	T	S	A	I	V	S	V	G	T	T	G	.	.	.	.	E	S	A	T	L	S	H	D	E	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	V	M	M	T	L	E	L	A	D	G	R	I	P	V	I	A	G	T	.	.	.	.	.
Template Known Secondary structure														T	T							S	S	T	T	T	.	.	.	.	T	G	G	G	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S	S							.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.																.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																									.																								.	.	.	.	.	.	.
Query SS confidence																																									.																								.	.	.	.	.	.	.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	.	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	A	G	.	.	.	.	.	.	.	A	Y	T	V	E	K	A	E	T	L
Query Conservation																																									.																								.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																		.																								.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	A	N	A	T	A	E	A	I	S	L	T	Q	R	F	N	D	S	G	I	V	G	C	L	T	V	T	P	Y	Y	N	R	P	T	Q	E	G	L	F	Q	H	F	K	A	I	A	E	H	T	D	L	P	Q	I	L	Y	N	V	P	S	R	T	G	C	D	M	L	P	E	T	V	G	R	L
Template Known Secondary structure		.	.	.	.	.	.			S	S										T	T	T	T	S	S											S	S																	T		S	S												S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		313	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	K	G	L	I	D	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	I	K	N	I	I	A	I
Template Known Secondary structure			T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions