Job Description P77258 Confidence 96.53% Date Thu Jan 5 12:26:56 GMT 2012 Rank 273 Aligned Residues 132 % Identity 22% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template Sequence		Y	E	Q	L	R	D	L	I	D	W	H	I	E	N	G	T	D	G	I	V	A	V	G	T	T	G	E	S	A	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	E	E	H	T	A	V	I	E	A	V	V	K	H	V	A	K	R	V	.	.	.	P	V	I	A	G	T	.	.	.	.	.
Template Known Secondary structure															T	T							S	S	T	T	T	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S	S	.	.	.							.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.							300	.	.	.	.		.	.	.	.	.	310	.	.
Predicted Secondary structure																																									.																					.	.	.	.	.	.						.
Query SS confidence																																									.																					.	.	.	.	.	.						.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	.	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	.	.	.	.	.	.	G	A	G	A	Y	.	T	V	E	K	A	E	T	L
Query Conservation																																									.																					.	.	.	.	.	.						.
Alig confidence		.	.	.	.	.	.																																		.																					.	.	.	.	.	.						.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	A	N	N	T	V	E	A	I	A	L	S	Q	A	A	E	K	A	G	A	D	Y	T	L	S	V	V	P	Y	Y	N	K	P	S	Q	E	G	I	Y	Q	H	F	K	T	I	A	E	A	T	S	I	P	M	I	I	Y	N	V	P	G	R	T	V	V	S	M	T	N	D	T	I	L	R	L
Template Known Secondary structure		.	.	.	.	.	.			S	S															T		S									S	S																	T			S												S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		313	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	K	G	L	I	D	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	I	P	N	I	V	G	V
Template Known Secondary structure		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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